Pinned Repositories
2019-0912-It-takes-a-spark
ABACBS2017Workshop
courses
Course materials for the Data Science Specialization: https://www.coursera.org/specialization/jhudatascience/1
CytofRUV
CytofRUV: Removing unwanted variation to integrate multiple CyTOF datasets.
kintsugi-coaching
mybioC
PhenoGraph
Subpopulation detection in high-dimensional single-cell data
Rscript
ruv-useR2018
TADbit
TADbit is a complete Python library to deal with all steps to analyze, model and explore 3C-based data. With TADbit the user can map FASTQ files to obtain raw interaction binned matrices (Hi-C like matrices), normalize and correct interaction matrices, identify and compare the so-called Topologically Associating Domains (TADs), build 3D models from the interaction matrices, and finally, extract structural properties from the models. TADbit is complemented by TADkit for visualizing 3D models
mtrussart's Repositories
mtrussart/CytofRUV
CytofRUV: Removing unwanted variation to integrate multiple CyTOF datasets.
mtrussart/2019-0912-It-takes-a-spark
mtrussart/ABACBS2017Workshop
mtrussart/courses
Course materials for the Data Science Specialization: https://www.coursera.org/specialization/jhudatascience/1
mtrussart/kintsugi-coaching
mtrussart/mybioC
mtrussart/PhenoGraph
Subpopulation detection in high-dimensional single-cell data
mtrussart/Rscript
mtrussart/ruv-useR2018
mtrussart/TADbit
TADbit is a complete Python library to deal with all steps to analyze, model and explore 3C-based data. With TADbit the user can map FASTQ files to obtain raw interaction binned matrices (Hi-C like matrices), normalize and correct interaction matrices, identify and compare the so-called Topologically Associating Domains (TADs), build 3D models from the interaction matrices, and finally, extract structural properties from the models. TADbit is complemented by TADkit for visualizing 3D models
mtrussart/zunderlab.github.io
Zunder Lab website