mtrussart/CytofRUV

normalise_data error: Error in solve.default(ac %*% t(ac))

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When I run the normalise_data step I get the following error:

Error in solve.default(ac %*% t(ac)) :
Lapack routine dgesv: system is exactly singular: U[1,1] = 0

Does anyone know what this means or how to fix it?

Thanks!

Hi,
I think it is related to your data design and your data matrix. Could you please share the details about the matrix design (conditions, batch...) and the replicated samples ?

Best wishes,
Marie