mulinlab

Pinned Repositories

3DCoop
Inferring cell type-specific transcriptional regulators cooperation in the context of 3D chromatin
Language:R1 0 13
CAUSALdb-finemapping-pip
A GWAS fine-mapping pipeline used in CAUSALdb
Language:Python25 1 105
cepip
Context-dependent epigenomic weighting for regulatory variant prioritization
Language:Java1 0 00
CHANCE
Personalized non-oncology drug repurposing for cancer treatment
Language:Perl1 1 00
epiCOLOC
Integrating large-scale and context-dependent epigenomics features for comprehensive colocalization analysis
Language:Python4 1 10
LoopAnchor
Quantitative modeling of CTCF-mediated loop anchors
Language:Python4 2 01
mulinlab-pip
mulinlab bioinformatics pipelines for reproducible, efficient and convenient bioinformatics research.
Language:HTML6 1 18
regBase
Base-wise aggregation and functional prediction for human non-coding regulatory variants
Language:Python15 1 43
VarNote
Fast and scalable variant annotation tool
Language:Java30 2 69
vSampler
Fast and annotation-based matched variant sampling tool
Language:Java1 1 21

mulinlab's Repositories

mulinlab/VarNote
Fast and scalable variant annotation tool
Language:Java30 2 69
mulinlab/CAUSALdb-finemapping-pip
A GWAS fine-mapping pipeline used in CAUSALdb
Language:Python25 1 105
mulinlab/regBase
Base-wise aggregation and functional prediction for human non-coding regulatory variants
Language:Python15 1 43
mulinlab/mulinlab-pip
mulinlab bioinformatics pipelines for reproducible, efficient and convenient bioinformatics research.
Language:HTML6 1 18
mulinlab/epiCOLOC
Integrating large-scale and context-dependent epigenomics features for comprehensive colocalization analysis
Language:Python4 1 10
mulinlab/LoopAnchor
Quantitative modeling of CTCF-mediated loop anchors
Language:Python4 2 01
mulinlab/3DCoop
Inferring cell type-specific transcriptional regulators cooperation in the context of 3D chromatin
Language:R1 0 13
mulinlab/cepip
Context-dependent epigenomic weighting for regulatory variant prioritization
Language:Java1 0 00
mulinlab/CHANCE
Personalized non-oncology drug repurposing for cancer treatment
Language:Perl1 1 00
mulinlab/vSampler
Fast and annotation-based matched variant sampling tool
Language:Java1 1 21
mulinlab/FIND
Stratifying variant pathogenicity and trait-modulating effect under human recent adaption
Language:Python