/neural-networks-for-breast-cancer-proteins

Machine Learning for breast cancer protein screening

Primary LanguageJupyter NotebookMIT LicenseMIT

neural-networks-for-breast-cancer-proteins

Machine Learning for breast cancer protein screening

This project is a collaboration from different institutions:

  • Centro de Investigación Genética y Genómica, Facultad de Ciencias de la Salud Eugenio Espejo, Universidad UTE, Mariscal Sucre Avenue, Quito 170129, Ecuador
  • RNASA-IMEDIR, Computer Science Faculty, University of Coruna, Coruna 15071, Spain
  • Red Latinoamericana de Implementación y Validación de Guías Clínicas Farmacogenómicas (RELIVAF-CYTED)
  • Grupo de Bio-Quimioinformática, Universidad de Las Américas, Avenue de los Granados, Quito 170125, Ecuador
  • Carrera de Enfermería, Facultad de Ciencias de la Salud, Universidad de Las Américas, Avenue de los Granados, Quito 170125, Ecuador
  • Centro de Investigación en Tecnologías de la Información y las Comunicaciones (CITIC), Campus de Elviña s/n 15071 A Coruña, Spain
  • Biomedical Research Institute of A Coruña (INIBIC), University Hospital Complex of A Coruña (CHUAC), 15006, A Coruña, Spain
  • Department of Organic Chemistry II, University of the Basque Country UPV/EHU, Leioa 48940, Biscay, Spain
  • IKERBASQUE, Basque Foundation for Science, Bilbao 48011, Biscay, Spain
  • Escuela de Ciencias Físicas y Matemáticas, Universidad de Las Américas, Avenue de los Granados, Quito 170125, Ecuador
  • Facultad de Ingeniería y Ciencias Agropecuarias, Universidad de Las Américas, Avenue de los Granados, Quito 170125, Ecuador

All jupyter notebooks have the results. Due to the file dimension we used ZIP archives. So, before to run the codes, please unzip the files in the corresponding folder after you clone the project.

Direct link to the article PDF

You can read and download the full article at https://rdcu.be/b4lvx.

Cite this work

López-Cortés, A., Cabrera-Andrade, A., Vázquez-Naya, J.M. et al. Prediction of breast cancer proteins involved in immunotherapy, metastasis, and RNA-binding using molecular descriptors and artificial neural networks. Sci Rep 10, 8515 (2020). https://doi.org/10.1038/s41598-020-65584-y

Have fun with ML! @muntisa