Pinned Repositories
apply_metaCCA
Exploring metaCCA method on UK Biobank data
epigraphdb-breast-cancer
Breast cancer risk factors exploration with MR-EvE and literature-mined data in EpiGraphDB https://mvab.github.io/epigraphdb-breast-cancer/
epigraphdb_mr_literature_queries
Examples of MR and literature-mined data queries to EpiGraphDB used in publication "Integrating Mendelian randomization and literature-mined evidence for breast cancer risk factors"
IVF-data-challenge
Data challenge based on HFEA IVF registry data
JGI-food-hazards-viz-challenge
Jean Golding Institute Food hazards data visualisation challenge http://www.bristol.ac.uk/golding/get-involved/competitions/food-hazards-from-around-the-world-data-competition/
mammographic_density_mr
MR project investigating the mediating role of mammographic density in the childhood body size and breast cancer relationship
mendelian-randomization-breast-cancer
Analysis workflow for MRC-IEU PhD mini-project on childhood BMI effect on breast cancer
mr_sleep_traits_breast_cancer
simulation_for_MR_mediation
Simulation of MR results to choose mediation method
TCGA_RNA-seq
Contains scripts for downloading and preprocessing TCGA RNA-seq data with TCGAbiolinks; EDA and DEA
mvab's Repositories
mvab/mendelian-randomization-breast-cancer
Analysis workflow for MRC-IEU PhD mini-project on childhood BMI effect on breast cancer
mvab/mammographic_density_mr
MR project investigating the mediating role of mammographic density in the childhood body size and breast cancer relationship
mvab/mr_sleep_traits_breast_cancer
mvab/simulation_for_MR_mediation
Simulation of MR results to choose mediation method
mvab/epigraphdb-breast-cancer
Breast cancer risk factors exploration with MR-EvE and literature-mined data in EpiGraphDB https://mvab.github.io/epigraphdb-breast-cancer/
mvab/epigraphdb_mr_literature_queries
Examples of MR and literature-mined data queries to EpiGraphDB used in publication "Integrating Mendelian randomization and literature-mined evidence for breast cancer risk factors"
mvab/TCGA_RNA-seq
Contains scripts for downloading and preprocessing TCGA RNA-seq data with TCGAbiolinks; EDA and DEA
mvab/IVF-data-challenge
Data challenge based on HFEA IVF registry data
mvab/apply_metaCCA
Exploring metaCCA method on UK Biobank data
mvab/JGI-food-hazards-viz-challenge
Jean Golding Institute Food hazards data visualisation challenge http://www.bristol.ac.uk/golding/get-involved/competitions/food-hazards-from-around-the-world-data-competition/
mvab/winter_critical_care_bed_occupancy_NHS
Winter visualisation challenge for P4 at MRC-IEU :santa: https://github.com/MRCIEU/P4winter-viz-challenge
mvab/ask-jgi-handbook
Documenting operations and procedures for the Ask-JGI consultation service.
mvab/blog
mvab/charity_shops_uk_clustering_OSM
mvab/ci-example
mvab/cv
My CV built using RMarkdown and the pagedown package, using the template from http://nickstrayer.me/cv/
mvab/demo-project2
demo repo for teaching Rproj
mvab/django-app
My first django app
mvab/epigraphdb-r
R package for epigraphdb
mvab/gitkatas
mvab/goneHacking
mvab/google_scholar_scraping
My first attempt at web-scraping with BeautifulSoup: scraping Google Scholar citations of the BCAC 2017 paper to collect all MR studies that used it
mvab/MasterThesisReport
sharelatex backup
mvab/ML-course-implementations
Cointains implementations of several learning algorithms for a Machine Learning course
mvab/mr-eve
mvab/quarto-uob-jgi
Quarto template for the Jean Golding Institute