nadanai263
Synthetic biology, biophysics, cell-free systems, machine learning, Bayesian methods
Edinburgh
Pinned Repositories
lbnc-cellfree2
Control of the cellfree2 microchemostat setup at LBNC-EPFL
lbnc-cellfreeview
View and analyse data from the cell-free chemostats at LBNC
2019_Swank_analysis
Model fits and analysis from 2019 Swank et al. paper
2020_Lavickova_model
Cell free model for the 2020 Lavickova et al. paper
academic-kickstart
CellFreeSim
Simulator for TXTL reactions
CFPS-metabolic
Implementation of Horvath et al. 2020 cell-free metabolic model
fittingmodeltodata
Fitting a model to data. Examples from Hogg, Bovy, Lang 2010
lbnc-cellfreeview
View and analyse data from the cell-free chemostats at LBNC
MCMC_emcee_intro
Introduction to MCMC with emcee
nadanai263's Repositories
nadanai263/lbnc-cellfreeview
View and analyse data from the cell-free chemostats at LBNC
nadanai263/MCMC_emcee_intro
Introduction to MCMC with emcee
nadanai263/2019_Swank_analysis
Model fits and analysis from 2019 Swank et al. paper
nadanai263/2020_Lavickova_model
Cell free model for the 2020 Lavickova et al. paper
nadanai263/academic-kickstart
nadanai263/CellFreeSim
Simulator for TXTL reactions
nadanai263/CFPS-metabolic
Implementation of Horvath et al. 2020 cell-free metabolic model
nadanai263/fittingmodeltodata
Fitting a model to data. Examples from Hogg, Bovy, Lang 2010
nadanai263/ChiBio
ChiBio primary operating system.
nadanai263/DifferentialEquations.jl
Julia suite for high-performance solvers of differential equations
nadanai263/emcee
The Python ensemble sampling toolkit for affine-invariant MCMC
nadanai263/genenetdemo
Implementation of Hiscock's GeneNet
nadanai263/introODE
Very brief introduction to ODEs
nadanai263/ipython-notebooks
A collection of IPython notebooks covering various topics.
nadanai263/julia-sciML-resources
Resources for scientific machine learning with Julia
nadanai263/lbnc-cellfree2
Control of the cellfree2 microchemostat setup at LBNC-EPFL
nadanai263/Life1-LuriaDelbruckAnalysis
Scripts for analysis of yeast fluctuation experiments
nadanai263/nadanai263.github.io
My lab website:
nadanai263/plot-templates
Plotting templates
nadanai263/plotly_dash_intro
Interactive plots with plotly and dash
nadanai263/Probabilistic-Programming-and-Bayesian-Methods-for-Hackers
aka "Bayesian Methods for Hackers": An introduction to Bayesian methods + probabilistic programming with a computation/understanding-first, mathematics-second point of view. All in pure Python ;)
nadanai263/tellurium
Python Environment for Modeling and Simulating Biological Systems
nadanai263/TXTL-survey
A survey of TXTL models available in the literature
nadanai263/UoE-iGEM2020-resources
Resources for UoE iGEM 2020 team