/SPT

Spatial profiling toolbox for spatial characterization of tumor immune microenvironment in multiplex images (https://oncopathtk.org)

Primary LanguagePythonOtherNOASSERTION



The Spatial Profiling Toolbox (SPT) is a lightweight deployment framework for cell analysis computation in the context of histopathology. The pipelines are orchestrated with Nextflow and support Singularity/Docker containerization.