Table Of Contents
- Machine Learning for Healthcare
- Companies
Machine Learning for Healthcare
This repository is a list of the all the relevant resources on applying machine learning to healthcare. If you see an article, repository, or other useful addition please make a pull request.
Introduction
Genomics
Precision Medicine/Drug Discovery
Clinical Named Entity Recognition system (CliNER)
Lesson Learned from Natural Language Inference in the Clinical Domain
Molecular De Novo design using Recurrent Neural Networks and Reinforcement Learning Code
NAACL Paper on Cross Speciality Entity Recognition for Medicine
Natural Language Processing for Precision Medicine ACL 2017 Tutorial.
Regression tree methods for precision medicine talk by Wei-Yin Loh University of Wisconsin-Madison, USA.
Survey of Computational Methods for Drug Discovery
Tools
Medical Imaging
Papers
Clinically Applicable deep learning for retinal disease diagnosis and referal
Dermatologist Level Skin Classification of skin cancer with deep neural networks
Overview of Deep Learning in Medical Imaging
On the Automatic Generation of Medical Imaging Reports
[OBELISK - One Kernel to Solve Nearly Everything: Unified 3D Binary Convolutions for Image Analysis(https://openreview.net/forum?id=BkZu9wooz)
Hybrid Retrieval-Generation Reinforced Agent for Medical Image Report Generation
Blogs, blog posts, and reddit discussions
A case study of text annotation for medical imaging - LightTag
Conferences and Workshops
Harvard Digital Doctor Symposium
Medical Imaging with deep learning MIDL
Medical Imaging Summer School 2014
Medical Image Computing and Computer Assisted Intervention
Machine Learning in Medical Imaging
SIM Conference on Machine Intelligence in Medical Imaging
CVPR 2018 Medical Imaging Workshop
Research Groups
Images Science Institute at Utrecht
Competitions
Digital Mammography Recall Challenge
Kaggle 2017 Data Science Bowl-Lung diagnosis
NIPS 2018 Prothestics Challenge
LUNA 16
Kaggle 2016 Data Science Bowl-Measuring ejection fraction
Videos
Learning to read deep learning papers -i.e. dicussion of ChexNet by Stanford
Datasets
Code Repositories
Tools
Other
Medical Image Analysis Network (UK)
Hospital Operations (i.e. OR Utilization, Scheduling, Discharge planning, HAIs...)
Detecting Hospital Acquired Infections with SVMs
Learning to predict post-hospitalization VTE risk from EHR data
Unsupervised Domain Adaptation for Clinical Negation Detection
Multitask Learning and Benchmarking with Clinical Time Series Data
Smart Hospital Hand Hygiene (Stanford)
Vision Based Prediction of ICU Mobility with RNNs
Signal processing, forecasting, and adverse event prediction
Papers
Analysing and Improving the Diagnosis of Ischaemic Heart Disease with Machine Learning NIH Article
Doctor AI: Predicting Clinical Events via Recurrent Neural Networks published in MLR
Cardiologist level classification of arrhythmia (Stanford)
Dynamic Bayesian Flu Forecasting
Other and Multiple Categories
Datasets
Clinical Case Reports Dataset for machine comprehension
EBM-NLP 5,000 richly annotated abstracts of medical articles
EMR-Question and Answering Code
Conferences
Machine Learning for Healthcare Conference
Trec Clinical Decision Support
Machine Learning for Healthcare 2018
2017 ICML Healthcare Related Talks
Ninth Workshop on Health Text Mining at EMNLP
Papers
Adversarial Attacks Against Medical Deep Learning Systems
Annotating a Large Representative Corpus of Clinical Notes for Parts of Speech
Deep Learning for Healthcare Review, Opportunities, Challenges published Oxford Academic.
Automated Medical Scribe for recording clinical encounters
Machine Learning for Medical Diagnosis PSU article 2006
EMER-QA A large corpus for question answering on electronic medical records
MiME: Multilevel Medical Embedding of Electronic Health Records for Predictive Healthcare
Courses
Machine Learning for Medicine MIT Course
Companies
Companies are arranged alphabetical order.