Pinned Repositories
bwa
Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)
bwa-gasal2
BWA-MEM program accelerated with the GASAL2 library
cpp-perf
Small header-only C++11 to measure code execution time and performance.
cub
CUB is a flexible library of cooperative threadblock primitives and other utilities for CUDA kernel programming.
cuda-samples
Samples for CUDA Developers which demonstrates features in CUDA Toolkit
GASAL
A CUDA library of DNA/RNA sequence alignment algorithms.
GASAL2
GASE
A generic DNA read aligner that allows to use different combinations of seeding and extension algorithms.
gase-gasal2
GASE/BWA-MEM seed-extension accelerated with GASAL2
nahmedraja's Repositories
nahmedraja/GASAL2
nahmedraja/GASAL
A CUDA library of DNA/RNA sequence alignment algorithms.
nahmedraja/GASE
A generic DNA read aligner that allows to use different combinations of seeding and extension algorithms.
nahmedraja/bwa
Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)
nahmedraja/bwa-gasal2
BWA-MEM program accelerated with the GASAL2 library
nahmedraja/cpp-perf
Small header-only C++11 to measure code execution time and performance.
nahmedraja/cub
CUB is a flexible library of cooperative threadblock primitives and other utilities for CUDA kernel programming.
nahmedraja/cuda-samples
Samples for CUDA Developers which demonstrates features in CUDA Toolkit
nahmedraja/gase-gasal2
GASE/BWA-MEM seed-extension accelerated with GASAL2
nahmedraja/GPUseed
nahmedraja/lab1
Advanced Computing Systems Lab1 files
nahmedraja/mulled
Mulled - Automatized Containerized Software Repository
nahmedraja/nvbio
NVBIO is a library of reusable components designed to accelerate bioinformatics applications using CUDA.
nahmedraja/test_copc
test copc