/SE-LSTMNet

SE-LSTMNet Model Using Polar Conversion for Diagnosis of Atherosclerosis

Primary LanguagePython

SE-LSTMNet

SE-LSTMNet Model Using Polar Conversion for Diagnosis of Atherosclerosis


1. Introduction

Atherosclerosis is a chronic vascular inflammatory disease in which plaque builds up in the arteries and impairs blood flow. This can lead to heart disease and stroke. Since most people do not have any symptoms until the artery is severely narrowed, early detection of atherosclerosis is critical.


2. Materials & Methods

Dataset

MICCAI 2022 CarOtid vessel wall SegMentation and Atherosclerosis diagnosis challenge (COSMOS)



Polar Conversion

applied to each VISTA slice based on the vessel center



Data Augmentation

  1. Shift Center-point [(0,0),(2,0),(-1,0),(0,2),(0,-1)]
  2. Polar patch Rotation & Flip
  3. Low Resolution (2x down-sample followed by 2x up-sample


SE-LSTMNet



3. Results

In this paper, in order to effectively detect atherosclerotic lesions in tube-shaped blood vessels, polar conversion is applied to MRI images based on the vessel center.

We then propose a SE-LSTMNet model using continuous signal information for each angle of a polar coordinate image.

Accuracy Sensitivity Specificity F1 Score AUC
fold1 0.8813 0.8675 0.9124 0.8251 0.9619
fold2 0.8853 0.8869 0.8832 0.8259 0.9608
fold3 0.9104 0.9338 0.8577 0.8545 0.9668
fold4 0.9048 0.9128 0.8869 0.8511 0.9067
fold5 0.9149 0.9386 0.8613 0.8613 0.9649
ensemble 0.9194 0.9370 0.8796 0.8700 0.9719
radiomics 0.8791 0.8998 0.8321 0.8085 0.9339