SUP Modification Basecalling Model Architecture
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harikaurel commented
Hi! From what I understand, Remora is integrated with Dorado, and the latest SUP canonical basecalling models now use Transformer-based architectures. I was curious if the SUP models for modification basecalling are also Transformer-based or if they still rely on CNNs and LSTMs?
malton-ont commented
Hi @harikaurel,
The modification models are currently CNN+LSTM.