make: *** [build] Error 128, fatal: unable to access 'https://git.oxfordnanolabs.local/bsipos/ont-assembly-polish.git/': Could not resolve host: git.oxfordnanolabs.local

[johnsolk]

Hello!

Encountered this Error with sudo make build on a fresh Ubuntu 16.04 instance on XSEDE's Jetstream VM platform. Seems unable to reach host: git.oxfordnanolabs.local. Any ideas what might be the cause and how I can fix?

Steps taken:

sudo apt-get -y update
wget -qO- https://get.docker.com/ | sudo sh
sudo usermod -aG docker ljcohen
git clone https://github.com/nanoporetech/ont-assembly-polish.git
cd ont-assembly-polish/
cd docker
sudo make build

Am eager to get this pipeline working for several ONT and Illumina data sets.

Thank you!
Lisa

Removing intermediate container 1b13998aec28
Step 10/13 : WORKDIR /home
 ---> 8ea414c482cc
Removing intermediate container 03118deebe65
Step 11/13 : ARG CACHEBUST
 ---> Running in 477ce3a32735
 ---> 07873f98a266
Removing intermediate container 477ce3a32735
Step 12/13 : RUN DUMMY=${CACHEBUST} GIT_SSL_NO_VERIFY=wizardry git clone https://git.oxfordnanolabs.local/bsipos/ont-assembly-polish.git
 ---> Running in 9a411e98566d
Cloning into 'ont-assembly-polish'...
fatal: unable to access 'https://git.oxfordnanolabs.local/bsipos/ont-assembly-polish.git/': Could not resolve host: git.oxfordnanolabs.local
The command '/bin/sh -c DUMMY=${CACHEBUST} GIT_SSL_NO_VERIFY=wizardry git clone https://git.oxfordnanolabs.local/bsipos/ont-assembly-polish.git' returned a non-zero code: 128
Makefile:4: recipe for target 'build' failed
make: *** [build] Error 128

[bsipos]

Hello. This was caused by a bug in the docker file. It is fixed now, please try to build again after you pulled the latest commit.

[johnsolk]

Thank you! Seems to be working now. :)