medaka requires pomoxis in order to run :: mini_align name conflict
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EricDeveaud commented
same problem here: nanoporetech/medaka#331
both pomoxis and medaka provides a mini_align script
currently they are in sync (no diffs)
may I suggest that either one of the distribution drops the min_align script, or mini_align name will be adapted in order to avoid name_conflicts
regards
Eric
cjw85 commented
Closing as duplicate.