Urgent Help Required: Regarding Error for modified basecalling
PRIYANKA-22091995 opened this issue · 1 comments
I was trying to run the following command for modified basecalling:
guppy_basecaller -i /DATA/BioLab/Priyanka/FAST5/EB_EL_FAST5/fast5/ -s /DATA/BioLab/Priyanka/FAST5/ -c /home/arnav/workspace/rerio/basecall_models/res_dna_r941_min_modbases-all-context_v001.cfg --recursive -a /home/arnav/workspace/PlasmoDB-61_PvivaxSal1_Genome.fasta --bam_out -x cuda:0 -m /home/arnav/workspace/rerio/basecall_models/res_dna_r941_min_modbases-all-context_v001.jsn --barcode_kits EXP-NBD104
But got the below error.
Unfortunately the Guppy implementation is not directly related to the Remora code base. I would suggest trying to upgrade to R10 and dorado where support will be much more active. If you need help with this Guppy command, I would recommend reaching out to customer service or the community page to log this issue.