nasiegel88
I am a grad student studying how the disruption of the airway microbiome early in life can lead to developmental deficiencies in the neonatal lung.
https://lmillerlab.faculty.ucdavis.edu/UC Davis
Pinned Repositories
nasiegel88.github.io
airquality
installR
Script to install multiple versions of R for Rstudio server
professional-docs
My professional documents
webvitals
2021-geo_datasets-gse149758
Single-cell analysis on control animals from Esaulova et al., 2021 Cell Host Microbe
tagseq-qiime2-snakemake-1
Pipeline to run qiime2 with snakemake
nasiegel88's Repositories
nasiegel88/nasiegel88.github.io
nasiegel88/professional-docs
My professional documents
nasiegel88/H.pylori-siegel_et_al_2022
nasiegel88/webvitals
nasiegel88/2023_kegg_analysis
nasiegel88/2021-geo_datasets-gse149758
Single-cell analysis on control animals from Esaulova et al., 2021 Cell Host Microbe
nasiegel88/2023-clincal
nasiegel88/2022-bal-concentrations
Calculations for 16S amplicon peak concentrations
nasiegel88/test-template-r
nasiegel88/airquality
nasiegel88/installR
Script to install multiple versions of R for Rstudio server
nasiegel88/2022-test-pbmc-seurat
nasiegel88/tagseq-qiime2-snakemake-1
Pipeline to run qiime2 with snakemake
nasiegel88/r-fundamentals
nasiegel88/rnaseq
nasiegel88/2021-metagenomics_metatranscriptomics-workshop
My notes from the 2021 UC Davis Metagenomics and Metatranscriptomics workshop
nasiegel88/10x-snake
General snakemake pipeline to generate cell matrices for single-cell analysis and .loom files to assess cell development
nasiegel88/2021-mca_workshop
nasiegel88/2020-dissertation
Dissertation writing for PhD at UC Davis
nasiegel88/genomics_201B
Lecture material from genomics, winter 2020
nasiegel88/2020-ggg-201b-assembly