natforsdick
she/her | Postdoc at Manaaki Whenua Landcare Research | conservation genomics | genome assembly | #birdnerd
Pinned Repositories
bioinformatics-bits-and-pieces
Small 'how to' guides and handy tips and tricks for a range of bioinformatic processes
GA-High-quality-genomes
This repository aims to hosting workflows/codes that have been developed for Genomics Aotearoa high-quality-genome projects.
Himantopus
All scripts related to PhD thesis research associated with hybridisation and conservation genomics of *Himantopus* spp.
kaki-genome-assembly
Scripts associated with kakī (*Himantopus novaezelandiae*) genome assembly using HiFi data
kuaka-hifi-scripts
Genome assembly for Kuaka Whenua Hou
kuaka-population-genomics
Population genomics for Kuaka Whenua Hou | Whenua Hou diving petrels and Kuaka | Common diving petrels
metagenomics_summer_school
Course materials for the Genomics Aotearoa Metagenomics Summer School, to be hosted at the University of Auckland in December
methods-and-musings
A (growing) collection of information contributed by Genomics Aotearoa members. Semi blog post style bites of content.
natforsdick.github.io
Personal webpage build
rewarewaannotation
Nextflow pipeline for genome annotation, with NeSI-specific set-up.
natforsdick's Repositories
natforsdick/Himantopus
All scripts related to PhD thesis research associated with hybridisation and conservation genomics of *Himantopus* spp.
natforsdick/natforsdick.github.io
Personal webpage build
natforsdick/rewarewaannotation
Nextflow pipeline for genome annotation, with NeSI-specific set-up.
natforsdick/bioinformatics-bits-and-pieces
Small 'how to' guides and handy tips and tricks for a range of bioinformatic processes
natforsdick/GA-High-quality-genomes
This repository aims to hosting workflows/codes that have been developed for Genomics Aotearoa high-quality-genome projects.
natforsdick/kaki-genome-assembly
Scripts associated with kakī (*Himantopus novaezelandiae*) genome assembly using HiFi data
natforsdick/kuaka-hifi-scripts
Genome assembly for Kuaka Whenua Hou
natforsdick/kuaka-population-genomics
Population genomics for Kuaka Whenua Hou | Whenua Hou diving petrels and Kuaka | Common diving petrels
natforsdick/metagenomics_summer_school
Course materials for the Genomics Aotearoa Metagenomics Summer School, to be hosted at the University of Auckland in December
natforsdick/methods-and-musings
A (growing) collection of information contributed by Genomics Aotearoa members. Semi blog post style bites of content.
natforsdick/myfirstpipeline
nf-core training
natforsdick/ONT-huhu
Repo containing all scripts associated with huhu nanopore data
natforsdick/pophelper
An R package to analyse and visualise admixture proportions from STRUCTURE, fastSTRUCTURE, TESS, ADMIXTURE etc.
natforsdick/slurm_native_h5_plotter_python
natforsdick/weta-genome-assembly
All scripts related to genome assembly for giant wētā
natforsdick/Weta_GBS
Repo containing all scripts associated with Mahoenui giant wētā population genomic analysis from GBS data
natforsdick/Weta_mtDNA_assembly
Assembling a wētā mitochondrial genome
natforsdick/Workshop-Bash_Scripting_And_HPC_Job_Scheduler
A workshop to get you started with automating your data analysis work in a High Performance Computing environment