Pinned Repositories
caffe-segnet-crf
Merger of SegNet and CRFasRNN caffe branches
CellProfiler-Analyst
Open-source software for exploring and analyzing large, high-dimensional image-derived data.
histo-seg
IIC
Invariant Information Clustering for Unsupervised Image Classification and Segmentation
imageLoadGUI
n-bodies-julia
pad
RL environment
segmentation
Tensorflow implementation for segmentation network pipelining
svsutils
Utilities for digital path slides
tfmodels
nathanin's Repositories
nathanin/IIC
Invariant Information Clustering for Unsupervised Image Classification and Segmentation
nathanin/segmentation
Tensorflow implementation for segmentation network pipelining
nathanin/pad
RL environment
nathanin/milk
Multiple instance learning
nathanin/ood
Out of distribution sample detection
nathanin/Probabilistic-Programming-and-Bayesian-Methods-for-Hackers
aka "Bayesian Methods for Hackers": An introduction to Bayesian methods + probabilistic programming with a computation/understanding-first, mathematics-second point of view. All in pure Python ;)
nathanin/tfmodels
nathanin/imageLoadGUI
nathanin/n-bodies-julia
nathanin/svsutils
Utilities for digital path slides
nathanin/arboreto
A scalable python-based framework for gene regulatory network inference using tree-based ensemble regressors.
nathanin/arxiv-sanity-preserver
Web interface for browsing, search and filtering recent arxiv submissions
nathanin/attention-sampling
This Python package enables the training and inference of deep learning models for very large data, such as megapixel images, using attention-sampling
nathanin/avocado
Avocado is a multi-scale deep tensor factorization model that learns a latent representation of the human epigenome and enables imputation of epigenomic experiments that have not yet been performed.
nathanin/awesome-single-cell
List of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
nathanin/ccsig
nathanin/desc
Deep Embedding for Single-cell Clustering
nathanin/gleason-grade-paper
nathanin/gradient-checkpointing
Make huge neural nets fit in memory
nathanin/micron2
nathanin/MINNs
Codes for our paper "Revisiting Multiple Instance Neural Networks".
nathanin/nathanin.github.io
GitHub IO site
nathanin/nfl-player-stats
Recorded statistics for all football players to ever play in the NFL
nathanin/nuclei
Autoencoders for histopathological nuclear morphology
nathanin/SCope
Fast visualization tool for large-scale and high dimensional single-cell data
nathanin/ScRNAseq.jl
nathanin/simple_gpu_scheduler
Simple scheduler for running jobs on GPUs
nathanin/spektral
Graph Neural Networks with Keras and Tensorflow 2.
nathanin/svs_reader
Convenient interface for generating tiles from Aperio SVS format images
nathanin/tensorflow
An Open Source Machine Learning Framework for Everyone