ncihtan/htan-portal

Update Data Access filtering logic

clarisse-lau opened this issue · 2 comments

clarisse-lau commented

@onursumer as discussed, providing an updated data access breakdown for new release 5.1 data according to recent discussions

  • CDS/SB-CGC (dbGaP)
    • BulkRNA, BulkWES, ScRNA, ScATAC, HI-C, BulkMethylation,10xVisiumSpatialTranscriptomics-RNA-seq Levels 1 & 2 as specified in released.entities table (CDS_Release) column
  • CDS/SB-CGC (Open Access)
    • ImagingLevel2, SRRSImagingLevel2 as specified in released.entities table (CDS_Release) column
  • Synapse (Open Access)
    • ElectronMicroscopy, RPPA, MassSpectrometry (all levels)
    • Level 3 & 4 all assays
    • Auxiliary & Accessory files/folders
  • Coming Soon
    • All other files pending CDS/SB-CGC release
clarisse-lau commented

@adamjtaylor would appreciate a sanity check!

onursumer commented

We should also update the file download logic defined here.

If data has been categorized as Synapse (Open access) behavior can be the same for all files regardless of level.