ncoudray/DeepPATH

Issues

• Issue running bazel

  #141 opened a year ago by suminwei
  0

• JSON file

  #140 opened a year ago by suminwei
  2

• normalize tile

  #115 opened a year ago by jessiya825
  1

• Reference image for Vahadane normalization

  #139 opened a year ago by bswhite
  2

• Multiple Instance Learning

  #138 opened 2 years ago by jafarinia
  1

• Color classification problem in 3-Analyze the outcome

  #137 opened 2 years ago by Gaodelike
  7

• Questions about cv2.findContours()

  #136 opened 2 years ago by Gaodelike
  1

• Use 0f_ HeatMap_ nClasses_ Overall.py has no result output

  #135 opened 2 years ago by Gaodelike
  0

• How can I use my data to build my json file?

  #134 opened 2 years ago by Gaodelike
  0

• In Pytorch

  #133 opened 2 years ago by jafarinia
  0

• Multi-label mutation data splits

  #129 opened 2 years ago by Arwa-AlRubaian
  0

• How to specify certain slides in a split

  #128 opened 2 years ago by Arwa-AlRubaian
  2

• How to compute the loss

  #127 opened 2 years ago by jafarinia
  1

• Mutation Prediction Data duplication

  #69 opened 3 years ago by SuzTulip
  1

• stuck at 0b_tileLoop_deepzoom6.py when tiles a very large tiff image.

  #107 opened 3 years ago by WeiLiuY
  2

• Which exact WSIs are selected for EGFR prediction?

  #101 opened 3 years ago by monajalal
  4

• train/test/folder image structure for fine-tuning via Inception V3 for mutation classification

  #100 opened 3 years ago by monajalal
  1

• Exact way of doing tile aggregation by averaging output probability

  #104 opened 3 years ago by monajalal
  1

• Clarification about Labels

  #108 opened 3 years ago by GeorgeBatch
  2

• mrxs images

  #106 opened 3 years ago by WeiLiuY
  1

• About Transfer Learning - Frozen weights?

  #102 opened 3 years ago by mitchellwiebe
  0

• Issue about Gene mutation prodiction

  #55 opened 3 years ago by yundumbledore
  2

• JSON files?

  #71 opened 3 years ago by jamesdiplomat
  6

• Data

  #79 opened 3 years ago by sahilkhose
  7

• Downsampling for low magnification tiles

  #92 opened 3 years ago by mitchellwiebe
  1

• Datasplits

  #89 opened 3 years ago by gabrieldernbach
  3

• Aperio ImageScope xml problem

  #94 opened 3 years ago by kirmedvedev
  14

• Get_Labstats_From_jpeg.py not in the repository

  #93 opened 3 years ago by monajalal
  0

• Data augmentation

  #61 opened 5 years ago by samkleeman1
  1

• About retrieve mutation information: "the barecode can be used to match images to sample."

  #88 opened 3 years ago by agentdr1
  2

• model.ckpt-81500.data-00000-of-00001

  #75 opened 4 years ago by ccchen-ccc
  9

• Choosing reference image for Vahadane normalization

  #78 opened 4 years ago by bajajsweta
  2

• A question about the dataset

  #77 opened 4 years ago by Ljiaqii
  1

• Hi,I found the LUAD and LUSC whole-slide images,I don’t know how to search the whole-slide images of normal lungs from the TCGA, could you tell me how to get it?Thanks.

  #76 opened 4 years ago by lsm-sunny
  0

• Hi:The data set link you provided shows that it cannot be accessed. Could you provide a link again?Thank you very much! Looking forward to hearing from you!

  #74 opened 4 years ago by lsm-sunny
  4

• Model checkpoints missing data file

  #60 opened 5 years ago by andanison
  10

• Number of LUAD, LUSC and Normal images

  #70 opened 4 years ago by Reasat
  3

• Testing the model produces different results without changing data for classes

  #73 opened 4 years ago by afrankel
  2

• About model saved

  #72 opened 4 years ago by Acmenwangtuo
  0

• Issues understanding the trained model predictions

  #68 opened 5 years ago by andanison
  1

• Freezing the auxillary classifier

  #67 opened 5 years ago by ratanman
  0

• Training the dataset using Folder name as image Labels

  #63 opened 5 years ago by ratanman
  1

• missing checkpoint data file

  #66 opened 5 years ago by RJieInGit
  1

• How do I evaluate a single TFRecord to determine the most likely label?

  #65 opened 5 years ago by afrankel
  6

• UnboundLocalError: local variable 'HeatMap_divider' referenced before assignment

  #64 opened 5 years ago by weizhenFrank
  3

• Tiling - can result in high FP?

  #62 opened 5 years ago by ratanman
  1

• Use 0b_tileLoop_deepzoom4.py to only get tile coordinates

  #59 opened 5 years ago by Tato14
  1

• Typo on example_TCGA_lung/checkpoints/README.md

  #58 opened 5 years ago by imxiaow
  1

• How to get the ROC curve

  #56 opened 5 years ago by MarkLeePro
  2

• Checkpoint Data Missing

  #54 opened 5 years ago by jeremykap
  2