ndobb

AdvancingSeq2Seq

Repository for EMNLP 2020 Submission "Advancing Seq2Seq Semantic Parsing with Joint Paraphrase Learning"

annotation_reconciler

bime534-lab

bime550_project3

BOLAA

clinical-trials-seq2seq-annotation

d3-lasso

A lasso plugin for d3

composure

Dynamic SQL Done Right

leaf

Leaf Clinical Data Explorer

postgis-docker

ndobb/clinical-trials-seq2seq-annotation

ndobb/d3-lasso

A lasso plugin for d3

ndobb/AdvancingSeq2Seq

Repository for EMNLP 2020 Submission "Advancing Seq2Seq Semantic Parsing with Joint Paraphrase Learning"

ndobb/BOLAA

ndobb/Criteria2SQL

ndobb/cse512_FP_data

ndobb/dissertation

ndobb/DT-Fixup

Optimizing Deeper Transformers on Small Datasets https://arxiv.org/abs/2012.15355

ndobb/dygiepp

Span-based system for named entity, relation, and event extraction.

ndobb/embeddings

Code for AMIA CRI 2016 paper "Learning Low-Dimensional Representations of Medical Concepts"

ndobb/GODEL

Large-scale pretrained models for goal-directed dialog

ndobb/icdpheno

ndobb/loinc2hpoAnnotation

loinc2hpo Annotation Data

ndobb/medtype

MedType: Improving Medical Entity Linking with Semantic Type Prediction

ndobb/metamaplite

A near real-time named-entity recognizer

ndobb/NER-BiLSTM-CRF-PyTorch

PyTorch implementation of BiLSTM-CRF and Bi-LSTM-CNN-CRF models for named entity recognition.

ndobb/nnfs

ndobb/PrimeKG

Precision Medicine Knowledge Graph (PrimeKG)

ndobb/pytorch_lstmcrf

Pytorch implementation of LSTM-CRF for named entity recognition

ndobb/react-text-annotate

React components for interactively highlighting parts of text.

ndobb/shallow-processing-uw

ndobb/t5-for-code-generation

Semantic Parsing with text-to-text Transformers

ndobb/t5_finetune

A simple example for finetuning HuggingFace T5 model. Includes code for intermediate generation.

ndobb/T5_nlg

Code for the medium blogpost "Data to Text generation with T5; Building a simple yet advanced NLG model"

ndobb/text-to-text-transfer-transformer

Code for the paper "Exploring the Limits of Transfer Learning with a Unified Text-to-Text Transformer"

ndobb/transformers-ner

Experiment on NER task using Huggingface state-of-the-art Transformers Natural Language Models library

ndobb/transformers-rel

ndobb/umls2rdf

These python scripts connect to the Unified Medical Language System (UMLS) database and translate the ontologies into RDF/OWL files. This is part of the BioPortal project.

ndobb/US_zipcode_topojson_extractor

Creates TopoJSON files of all the zip codes in each state

ndobb/uw-bime554