ne1s0n

bioinformateachers

Code archive linked to the bioinformatics-oriented educational website bioinformateachers.wordpress.com

coding_excercises

A public repo for slides and exercise for the "Introduction to deep learning for biologists" Physalia course, by Nelson Nazzicari and Filippo Biscarini

crea-za_2024_geno_pheno_arabidopsis

CREA-ZA_metabarcoding-grana

Metabarcoding analysis on Grana cheese, by CREA-ZA research group (Lodi, Italy)

dataviz_python

A repository supporting the Physalia course on data visualization in python

MTGOsc

MTGO applied to Single Cell analysis

ne1s0n/coding_excercises

A public repo for slides and exercise for the "Introduction to deep learning for biologists" Physalia course, by Nelson Nazzicari and Filippo Biscarini

ne1s0n/bioinformateachers

Code archive linked to the bioinformatics-oriented educational website bioinformateachers.wordpress.com

ne1s0n/MTGOsc

MTGO applied to Single Cell analysis

ne1s0n/dataviz_python

A repository supporting the Physalia course on data visualization in python

ne1s0n/crea-za_2024_geno_pheno_arabidopsis

ne1s0n/CREA-ZA_metabarcoding-grana

Metabarcoding analysis on Grana cheese, by CREA-ZA research group (Lodi, Italy)

ne1s0n/CREA-ZA_Spallanzani_metabarcoding-grana-veg

Metabarcoding analysis on milk used to produce Grana Padano cheese

ne1s0n/dataviz_python_2021

ne1s0n/dDocent

a bash pipeline for RAD sequencing

ne1s0n/deep-meta

Drug resistance prediction from metagenomics raw sequence data using deep learning

ne1s0n/drone2report

From drone images to summary report

ne1s0n/GBS-PreProcess

Scripts to pre-process Genotyping-by-Sequencing data (GBS) before analysis with STACKS.

ne1s0n/GBS-SNP-CROP

ne1s0n/legpipe2

SNP calling pipeline

ne1s0n/paper-GBS-imputation

ne1s0n/parsimony

Parsimonious predictor for binary traits in sugar beet

ne1s0n/pyGBS-PreProcess

Python reimplementation of existing repository GBS-PreProcess

ne1s0n/test-project