ne1s0n
Bioinformatics, biostatistics, general code cranking. Currently tenured scientist at CREA-ZA, Italy.
Pinned Repositories
bioinformateachers
Code archive linked to the bioinformatics-oriented educational website bioinformateachers.wordpress.com
coding_excercises
A public repo for slides and exercise for the "Introduction to deep learning for biologists" Physalia course, by Nelson Nazzicari and Filippo Biscarini
crea-za_2024_geno_pheno_arabidopsis
CREA-ZA_metabarcoding-grana
Metabarcoding analysis on Grana cheese, by CREA-ZA research group (Lodi, Italy)
dataviz_python
A repository supporting the Physalia course on data visualization in python
MTGOsc
MTGO applied to Single Cell analysis
ne1s0n's Repositories
ne1s0n/coding_excercises
A public repo for slides and exercise for the "Introduction to deep learning for biologists" Physalia course, by Nelson Nazzicari and Filippo Biscarini
ne1s0n/bioinformateachers
Code archive linked to the bioinformatics-oriented educational website bioinformateachers.wordpress.com
ne1s0n/MTGOsc
MTGO applied to Single Cell analysis
ne1s0n/dataviz_python
A repository supporting the Physalia course on data visualization in python
ne1s0n/crea-za_2024_geno_pheno_arabidopsis
ne1s0n/CREA-ZA_metabarcoding-grana
Metabarcoding analysis on Grana cheese, by CREA-ZA research group (Lodi, Italy)
ne1s0n/CREA-ZA_Spallanzani_metabarcoding-grana-veg
Metabarcoding analysis on milk used to produce Grana Padano cheese
ne1s0n/dataviz_python_2021
ne1s0n/dDocent
a bash pipeline for RAD sequencing
ne1s0n/deep-meta
Drug resistance prediction from metagenomics raw sequence data using deep learning
ne1s0n/GBS-PreProcess
Scripts to pre-process Genotyping-by-Sequencing data (GBS) before analysis with STACKS.
ne1s0n/GBS-SNP-CROP
ne1s0n/legpipe2
SNP calling pipeline
ne1s0n/paper-GBS-imputation
ne1s0n/parsimony
Parsimonious predictor for binary traits in sugar beet
ne1s0n/pyGBS-PreProcess
Python reimplementation of existing repository GBS-PreProcess
ne1s0n/test-project