/scgat_scnd

tutorial for Cell paper

Primary LanguageJupyter Notebook

Deep learning for longitudinal single-cell analysis

scGAT

Bacgkround

Geometric deep learning is especially suited for inference of single-cell data (see Ravindra et al. ACM CHIL 2020).

Implementation

We devise a custom implementation for geometric deep learning of single-cell data that is suited for longitudinal analysis.

The tutorial is provided in this GitHub repo.

Tutorial overview

Organization

data.py: