Installation of mimseq package
Closed this issue · 3 comments
Phontia commented
Dear all,
I'm trying to install the mimseq package by following your STAR protocol.
However, when testing the installation by using the commands:
> mimseq –version
> mimseq –help
I get the following output
_ _ ____ _ _ _
_ __ ___ (_)_ __ ___ | |_| _ \| \ | | / \ ___ ___ __ _
| '_ ` _ \| | '_ ` _ \ _____| __| |_) | \| | / _ \ / __|/ _ \/ _` |
| | | | | | | | | | | |_____| |_| _ <| |\ |/ ___ \\__ \ __/ (_| |
|_| |_| |_|_|_| |_| |_| \__|_| \_\_| \_/_/ \_\___/\___|\__, |
|_|
Modification-induced misincorporation analysis of tRNA sequencing data
usage: mimseq [options] sample data
mimseq: error: the following arguments are required: -s/--species, --control-condition, -n/--name
Could you please help me understand what went wrong?
Best,
Andy
nedialkova-lab commented
Hi Andy - try mimseq --version and mimseq --help.
Phontia commented
Ah thank you! It is properly installed then it seems :)
Sorry for the simple mistake.
Best,
Andy
nedialkova-lab commented
No worries - happy to hear the installation worked!