neocaleb

Assistant Professor, Soongsil University

SOONGSIL UNIVERSITYSeoul

Pinned Repositories

CellBIC
Bimodality-based top-down clustering of single-cell RNA sequencing data
Language:MATLAB4 0 01
csv_to_10Xdata
Language:Python0 1 00
fasttenet
FastTENET
Language:Python00
NetworkPractice
Language:Python2 1 00
NicheSVM
NicheSVM is a tool for analyzing PICs (Physically Interacting Cells) to detect niche-specific expression.
Language:MATLAB4 1 02
SHARP
SHARP: Single-cell RNA-seq Hyper-fast and Accurate processing via ensemble Random Projection
Language:R10
sp_tsne
Language:Python1 0 00
TENET
TENET is a tool for reconstructing gene regulatory networks from pseudo-time ordered single-cell transcriptomic data.
Language:Python40 1 138
VeTenet
Language:Python1 0 00
VeTra
Language:Python20

neocaleb's Repositories

neocaleb/TENET
TENET is a tool for reconstructing gene regulatory networks from pseudo-time ordered single-cell transcriptomic data.
Language:Python40 1 138
neocaleb/CellBIC
Bimodality-based top-down clustering of single-cell RNA sequencing data
Language:MATLAB4 0 01
neocaleb/NicheSVM
NicheSVM is a tool for analyzing PICs (Physically Interacting Cells) to detect niche-specific expression.
Language:MATLAB4 1 02
neocaleb/NetworkPractice
Language:Python2 1 00
neocaleb/VeTra
Language:Python20
neocaleb/SHARP
SHARP: Single-cell RNA-seq Hyper-fast and Accurate processing via ensemble Random Projection
Language:R10
neocaleb/sp_tsne
Language:Python1 0 00
neocaleb/VeTenet
Language:Python1 0 00
neocaleb/csv_to_10Xdata
Language:Python0 1 00
neocaleb/fasttenet
FastTENET
Language:Python00
neocaleb/gene_specificGO
Language:Python0 1 00
neocaleb/scRNAseqPractice
Language:Python1
neocaleb/TENETPLUS
Developed version of TENET using ATAC seq - multiome version (non-multiome version is under construction)
Language:R0 0
neocaleb/Vesalius
Vesalius: Dissecting Tissue Anatomy from Spatial Transcriptomic Data