Pinned Repositories
BirdsongAnalysisMatlab
DBS_SingleUnit_Meta
Analysis Tools for DBS MER Data
EpiSurg
MATLAB & Bash Scripts for analyzing neurodata acquired from epilepsy patients
everything
An index of all our open-source data, analysis, libraries, tools, and guides.
JennImageAnalysis
Matlab based cell counter GUI
LFP_Analyses_DBS
LFP_GenericRepos
Neurophysiology_Database
Matlab mfiles for my neuro database
ROSA_CC_Disconnection
SCLayerGUI
neuropil's Repositories
neuropil/Quinn2021_Waveform
Analysis scripts accompanying "Within-cycle instantaneous frequency profiles report oscillatory waveform dynamics" https://doi.org/10.1101/2021.04.12.439547
neuropil/sleep_ann
predicting sleep state from lfp traces
neuropil/WaveMAP_Paper
This repo allows for the complete reproduction, from processed data, of all the main and supplemental figures in the manuscript Non-linear Dimensionality Reduction on Extracellular Waveforms Reveals Physiological, Functional, and Laminar Diversity in Premotor Cortex.
neuropil/DBS_SingleUnit_Meta
Analysis Tools for DBS MER Data
neuropil/AT_PDil
neuropil/beyond-bar-and-box-plots
Hands–on code to create and style chart alternatives with ggplot2
neuropil/bilateralMDT2
Clone me to create your Manubot manuscript
neuropil/brainstormSEEGutils
neuropil/closed_loop_mdd
neuropil/connectome_spectral_analysis
Repository for paper https://authors.elsevier.com/sd/article/S1053-8119(21)00884-3
neuropil/dandi-example-live-scripts-000207
neuropil/Datalogger
Repository for analyzing natural social behavior usind deuteron datalogger
neuropil/DBSegment
This is a deep learning-based method to segment deep brain structures and a brain mask from T1 weighted MRI.
neuropil/Demos
Demos of coding, scripts, functions, and apps
neuropil/drk_CodeRepo
all code prior to my lab at CU_attempt2
neuropil/emu
neuropil/finetune_detr
trying out finetuning detr on small datasets
neuropil/freerecall_travelingwaves
code for analyses in Mohan et al. 2024
neuropil/kontur_rayshader_tutorial
neuropil/MatlabProjectTEST
neuropil/nlx2med2mat
neuropil/NRSC7657
neuropil/pac_investigation
Investigating the link between spiking activity based beta bursts and lfp based beta activity using PAC
neuropil/python-quickstart
MSLearn sample code
neuropil/spectral_connectivity
Frequency domain estimation and functional and directed connectivity analysis tools for electrophysiological data
neuropil/subNetworkDynamics
neuropil/thalamus3D-DBS
neuropil/timeseries-clustering-vae
Variational Recurrent Autoencoder for timeseries clustering in pytorch
neuropil/TUBB4A_caseReport
neuropil/vision_ui
This is a vision-based 3d model manipulation and control UI