Failed to publish file => double forward slashes
nick-youngblut opened this issue · 0 comments
nick-youngblut commented
Description of the bug
For --outdir
I included a trailing forward slash in the gs://
path, which resulted in Failed to publish file:
warnings.
It appears that the pipeline is concatenating strings versus using file(params.outdir) / "path/to/output"
.
Command used and terminal output
`--outdir gs://path/to/output/` instead of `--outdir gs://path/to/output`
Relevant files
No response
System information
- nextflow 23.10.1
- GCP
- Docker
- pipeline job run from linux VM on GCP Compute Engine