Test full profile not working in dev
Closed this issue · 1 comments
nschcolnicov commented
When running the test_full profile in dev I get the error:
* --matrix (https://raw.githubusercontent.com/nf-core/test-datasets/differentialabundance/testdata/rnaseq_featurecounts_merged_gene_counts.txt): "https://raw.githubusercontent.com/nf-core/test-datasets/differentialabundance/testdata/rnaseq_featurecounts_merged_gene_counts.txt" does not match regular expression [^\S+\.(tsv|csv)$|\S*proteinGroups\.txt$]
Command used:
nextflow run nf-core/differentialabundance -latest -r dev -profile docker,test_full --outdir results -resume
nschcolnicov commented
The profile is working in master, I see that it is not working after this PR, due to an update in the pattern in the nextflow_schema:
#304
The file still works, just needs to be renamed to match the new pattern requirements.
I renamed the dataset:
nf-core/test-datasets@b8fca21
This is the PR to update the profile so that it uses the new name:
#348