working installation
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bluegenes commented
On 04/04/2023, I did a fresh install with the following approach:
I wrote the following environment.yml
:
name: 2023-snakemake-book-draft
channels:
- conda-forge
- bioconda
- defaults
dependencies:
- rust>=1.67,<2
- snakemake>=7.25,<8
- sourmash-minimal>=4.6.1,<5
Create and activate this environment:
mamba env create -f environment.yml
mamba activate 2023-snakemake-book-draft
To install mdbook-admonish
in this env, I ran:
cargo install mdbook-admonish
Then, as directed, I added the following line to my ~/.zshrc
to add the cargo bin to my path:
export PATH="$PATH:Users/ntward/.cargo/bin"
Then I ran make test
to verify the install was working.