Pinned Repositories
10xPilot_snRNAseq-human
10x snRNA-seq study on 5 postmortem human brain regions across the reward circuitry: NAc, AMY, sACC, DLPFC, and HPC
applied-computational-genomics
Applied Computational Genomics Course at UU: Spring 2020
BBS230B_2023
RNA-seq experimental design and analysis
bioinfo-notebook
🔬 Bioinformatics Notebook. Scripts for bioinformatics pipelines, with quick start guides for programs and video demonstrations.
Bioinformatics-Workshops
Workshops presented by the Gladstone Bioinformatics Core
bioinformatics_online
Resource list and preparation instructions for online learning and teaching for Bioinformatics
bootcamp
Caltech Introduction to Programming for the Biological Science Bootcamp
Caltech_DATASAI_Neuroscience_23
A course organized by the Chen Institute for Neuroscience at Caltech on data analysis techniques in neuroscience
cancer-gene-expression-by-ML
Breast-cancer-gene-expression-by-ML
Cancer-prediction-using-statistical-models
Cancer-prediction-using-statistical-models
ngshasan's Repositories
ngshasan/10xPilot_snRNAseq-human
10x snRNA-seq study on 5 postmortem human brain regions across the reward circuitry: NAc, AMY, sACC, DLPFC, and HPC
ngshasan/applied-computational-genomics
Applied Computational Genomics Course at UU: Spring 2020
ngshasan/BBS230B_2023
RNA-seq experimental design and analysis
ngshasan/Bioinformatics-Workshops
Workshops presented by the Gladstone Bioinformatics Core
ngshasan/bioinformatics_online
Resource list and preparation instructions for online learning and teaching for Bioinformatics
ngshasan/bootcamp
Caltech Introduction to Programming for the Biological Science Bootcamp
ngshasan/Caltech_DATASAI_Neuroscience_23
A course organized by the Chen Institute for Neuroscience at Caltech on data analysis techniques in neuroscience
ngshasan/cancer-gene-expression-by-ML
Breast-cancer-gene-expression-by-ML
ngshasan/GIT-GITHUB-Rstudio-Bitbucket
Steps of using Git/Github in Terminal and Github in R.
ngshasan/gitkraken_workshop
Hands-on class with GUI GitKraken
ngshasan/Integration-of-scRNA-Seq-Data
Integrated Analysis of scRNA-Seq Data across species using R/Seurat
ngshasan/NGS-Analysis-in-R
NGS Analysis in R/Bioconductor.
ngshasan/Protein-Protein-Interaction-by-Python
ngshasan/sanbomics_scripts
scripts and notebooks from sanbomics
ngshasan/scRNA-marker-gene-Annotation
scRNA-marker-gene-Annotation.
ngshasan/single-cell-RNA-Seq-Data-Analysis-Methods
single-cell-RNA-Seq-Data-Analysis-Methods
ngshasan/Chen_Institute_DataSAI_for_Neuroscience
ngshasan/compbio_tutorials
ngshasan/CSAMA2016
Repository for CSAMA 2016 course material
ngshasan/deepvariant
DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.
ngshasan/DGE_workshop_salmon_online
ngshasan/gtex-pipeline
GTEx & TOPMed data production and analysis pipelines
ngshasan/happy-git-with-r
Using Git and GitHub with R, Rstudio, and R Markdown
ngshasan/Intro-to-ChIPseq
Intro to ChIPseq using HPC
ngshasan/Intro-to-ChIPseq-flipped
ngshasan/scRNA-seq_online
ngshasan/slivar
genetic variant expressions, annotation, and filtering for great good.
ngshasan/STAT545
A 📖 on data wrangling, exploration, & analysis with R - created by Jenny Bryan of UBC, made with bookdown
ngshasan/Training-modules
Materials for short, half-day workshops
ngshasan/variant_analysis