Repository to accompany with discussion forum post (https://www.kaggle.com/competitions/rsna-breast-cancer-detection/discussion/391979).
- Download the dataset from Kaggle and unzip to
data/folder
kaggle competitions download -c rsna-breast-cancer-detection
mkdir data/
unzip rsna-breast-cancer-detection.zip -d data/
- Extract pixel arrays from DICOM files, resize with aspect-ratio preserving and save to disk
python dicom_pipeline.py data/train_images data/train_png_images --src-csv data/train.csv --size 1536
- Crop breast RoI using YOLOX detector
python crop_roi.py data/train_png_images --src-csv data/train.csv --tgt-csv data/train_kaggle_yolox.csv