Pinned Repositories
aespca
Code to reproduce Adaptive elastic-net sparse PCA for robust cross-species, cross-platform analysis of complex gene expression data in Alzheimer’s disease (Hin et al.)
Bioinfo-Notes
Small collection of useful bioinformatics analysis notes
Bulk_RNAseq_Workshop
Workshop tutorial for RNA-seq and differential gene expression analysis using R programming and Bioconductor packages.
Clot_Proteomics
Exploratory analysis of proteomics data.
ire
Code to reproduce analyses in Iron Responsive Element (IRE)-mediated responses to iron dyshomeostasis in Alzheimer’s disease (Hin et al.)
nhihin
About me + CV
sampleDB
Store and manage samples in SQL database through shiny application.
TidyTuesday
Various TidyTuesday analyses from SAHMRI's R/TidyTuesday study group.
zebrafish-RNAseq
RNA-seq processing pipeline for zebrafish dataset using bash scripts and SLURM array jobs.
nhihin's Repositories
nhihin/Bulk_RNAseq_Workshop
Workshop tutorial for RNA-seq and differential gene expression analysis using R programming and Bioconductor packages.
nhihin/zebrafish-RNAseq
RNA-seq processing pipeline for zebrafish dataset using bash scripts and SLURM array jobs.
nhihin/aespca
Code to reproduce Adaptive elastic-net sparse PCA for robust cross-species, cross-platform analysis of complex gene expression data in Alzheimer’s disease (Hin et al.)
nhihin/Bioinfo-Notes
Small collection of useful bioinformatics analysis notes
nhihin/nhihin
About me + CV
nhihin/sampleDB
Store and manage samples in SQL database through shiny application.
nhihin/Clot_Proteomics
Exploratory analysis of proteomics data.
nhihin/ire
Code to reproduce analyses in Iron Responsive Element (IRE)-mediated responses to iron dyshomeostasis in Alzheimer’s disease (Hin et al.)
nhihin/TidyTuesday
Various TidyTuesday analyses from SAHMRI's R/TidyTuesday study group.
nhihin/gradient2Lines
Given a particular gradient, randomly pick colours from the gradient and draw a series of lines.
nhihin/K97fsZebrafishAnalysis
Analysis of transcriptome and proteome data from K97fs zebrafish model of Alzheimer's disease.
nhihin/MGI_Index
nhihin/nf-rnaseq-sagc
RNAseq quantification pipeline
nhihin/nhihin.github.io
Personal website/landing page
nhihin/PriceTracker
Automatic scraping and tracking of prices of products of interest (only supports Chemist Warehouse and Sephora so far)
nhihin/processing-sketches
Learning basic object oriented programming with Processing
nhihin/PseudoreplicationPaper
Code used to carry out parameter estimation, correlation estimation, type 1 error analysis, and power analysis for our "Pseudoreplication in Single-Cell" study
nhihin/q96k97
Analysis to reproduce RNA-seq analysis of the Q96K97 zebrafish dataset as described in Newman & Hin (2020), Mol. Brain.
nhihin/sc-workflowr
Code for the analysis chapter of my PhD thesis looking at kidney organoid scRNA-seq data
nhihin/scGPT
nhihin/singularity-example
nhihin/workshop-sysadmin