Chaos Game Representation
A Python script to generate the chaos game representation of a DNA sequence (https://towardsdatascience.com/chaos-game-representation-of-a-genetic-sequence-4681f1a67e14).
Here an example with a SARS-CoV-2 sequence.
Further modifications
The .fasta
sequences are not handled in a smart way. The output of this script is a matplotlib
plot. In future I want the program to produce images with arbitrary resolution in which the actual matplotlib points will be substituted with the pixels, in order to train neural networks with images containing sequences features. Probably I will do it with SeqIO
from Bio
and OpenCV
, in Python.