nikolas-claussen

PhD student at the University of California, Santa Barbara

Pinned Repositories

PyMeshLab
The open source mesh processing python library
Language:C++823 24 29069
nbdev
Create delightful software with Jupyter Notebooks
Language:Jupyter Notebook4.9k 47 889492
blender-tissue-cartography
Extract surfaces from volumetric microscopy images and project volumetric data to planar textures using blender
Language:Jupyter Notebook3 2 00
CE_simulation_public
tension-dynamics model of epithelial convergent extension [arXiv:2311.16384]
Language:Jupyter Notebook00
Geometric-control-of-Myosin-II-orientation-during-axis-elongation
Image processing code for the paper "Geometric control of Myosin-II orientation during axis elongation" by Lefebvre et al.
Language:Python0 1 00
geometric_basis_of_convergent_extension_simulation
Code for the simulations shown in the paper "The geometric basis of epithelial convergent extension" by F. Brauns, N.H. Claussen, E.F. Wieschaus, and B.I. Shraiman.
Language:Jupyter Notebook00
mechanical_feedback
Code for the investiagtion of mechanical feedback in the Drosophila embryo
Language:Jupyter Notebook1 1 00
windowed_radon
Detect line-like elements in image with a windowed radon filter
Language:Jupyter Notebook00
meshio
:spider_web: input/output for many mesh formats
Language:Python2k 40 607410
diffrax
Numerical differential equation solvers in JAX. Autodifferentiable and GPU-capable. https://docs.kidger.site/diffrax/
Language:Python1.5k 22 366140

nikolas-claussen/blender-tissue-cartography
Extract surfaces from volumetric microscopy images and project volumetric data to planar textures using blender
Language:Jupyter Notebook3 2 00
nikolas-claussen/mechanical_feedback
Code for the investiagtion of mechanical feedback in the Drosophila embryo
Language:Jupyter Notebook1 1 00
nikolas-claussen/CE_simulation_public
tension-dynamics model of epithelial convergent extension [arXiv:2311.16384]
Language:Jupyter Notebook00
nikolas-claussen/Geometric-control-of-Myosin-II-orientation-during-axis-elongation
Image processing code for the paper "Geometric control of Myosin-II orientation during axis elongation" by Lefebvre et al.
Language:Python0 1 00
nikolas-claussen/geometric_basis_of_convergent_extension_simulation
Code for the simulations shown in the paper "The geometric basis of epithelial convergent extension" by F. Brauns, N.H. Claussen, E.F. Wieschaus, and B.I. Shraiman.
Language:Jupyter Notebook00
nikolas-claussen/hello-world
my very first repo
0 1 00