nilesh-iiita
🎓Computational Biologist at the "Ircp-Biological Data Sciences"
University of Alabama at Birmingham1720 University Blvd, Birmingham, AL 35294
Pinned Repositories
Bioinfo_scripts
CentralityCosDist
Deep-Learning-in-Bioinformatics-Papers-Reading-Roadmap
Deep Learning in bioinformatics papers reading roadmap for anyone who are eager to applying this amazing tech in bioinformatics!
ENDNOTE_IF_FORMAT
FORMAT ENDNOTE
ffq
A tool to find sequencing data and metadata from public databases.
PATHAK
NLP-based method to mine gene and function relationships from published articles.
POTFUL
POTFUL Plant cO-expression Transcription Factor regULators
VTTSHI
WkShell.2.2.1
k-shell decomposition python
nilesh-iiita's Repositories
nilesh-iiita/Bioinfo_scripts
nilesh-iiita/WES-pipelines
Benchmarking of aligners and variant callers for Whole Exome Sequencing data
nilesh-iiita/WkShell.2.2.1
k-shell decomposition python
nilesh-iiita/Beeline
BEELINE: evaluation of algorithms for gene regulatory network inference
nilesh-iiita/bert-gen
nilesh-iiita/Bioinformatics
Bioinformatics scripts
nilesh-iiita/decagon
Graph convolutional neural network for multirelational link prediction
nilesh-iiita/decagon-1
nilesh-iiita/decagon-2
nilesh-iiita/deep-learning-with-python-notebooks
Jupyter notebooks for the code samples of the book "Deep Learning with Python"
nilesh-iiita/deepDecagon
nilesh-iiita/docs
Documentation of the Snakemake-Workflows project
nilesh-iiita/GCNII
PyTorch implementation of "Simple and Deep Graph Convolutional Networks"
nilesh-iiita/GREIN
GREIN : GEO RNA-seq Experiments Interactive Navigator
nilesh-iiita/HSA
nilesh-iiita/ISIS3
Integrated Software for Imagers and Spectrometers v3. ISIS3 is a digital image processing software package to manipulate imagery collected by current and past NASA and International planetary missions.
nilesh-iiita/MoCaSeq
Analysis pipelines for cancer genome sequencing in mice.
nilesh-iiita/MONET
MONET : MOdularising NEtwork Toolbox - doi: https://doi.org/10.1101/611418
nilesh-iiita/Overview-of-GRN
nilesh-iiita/PANDA
nilesh-iiita/PJ_GCN
Reproduce the result of Decagon
nilesh-iiita/pyImSegm
Image segmentation - general superpixel segmentation & center detection & region growing
nilesh-iiita/ReDecagon
nilesh-iiita/SARS-CoV-2_Sequencing
A collection of sequencing protocols and bioinformatic resources for SARS-CoV-2 sequencing.
nilesh-iiita/scLepr
nilesh-iiita/SFAnalysis
nilesh-iiita/SR2019
nilesh-iiita/TSUNAMI
An R software for Gene Co-Expression Analysis
nilesh-iiita/UpSetR
An R implementation of the UpSet set visualization technique published by Lex, Gehlenborg, et al..
nilesh-iiita/wk-shell-decomposition
A Cytoscape app to perform weighted k-shell decomposition