njaupan/ecc_finder

Issues

• Run failed... cannot detect split reads

  #25 opened 5 months ago
  0

• non eccDNA-seq long-read data

  #23 opened 10 months ago
  0

• Question regarding the reference genome used in ecc_finder

  #22 opened a year ago
  1

• Can eccDNA identified by ecc_finder be validated by inverse PCR?

  #21 opened a year ago
  0

• Run failed

  #20 opened 2 years ago
  0

• Miss a `)` at the end of the setup.py?

  #19 opened 2 years ago
  0

• Query on input data type

  #18 opened 2 years ago
  1

• Installation error

  #17 opened 2 years ago
  18

• size distribution graph

  #16 opened 2 years ago
  2

• Short read aligners

  #15 opened 2 years ago
  0

• Problems with bedtools merge

  #14 opened 2 years ago
  4

• Using pre-computed BAM files? Trouble installing on Linux cluster but works okay on Mac

  #13 opened 2 years ago
  4

• Questions about Genrich in MAP-ONT

  #12 opened 2 years ago
  1

• Error! m54294U_200627_102135/723/0_112904_rep0_sub0/2: poorly formatted SAM/BAM record

  #11 opened 2 years ago
  1

• Types of input files

  #10 opened 2 years ago
  1

• Why my short reads assembly outcome was deleted?

  #9 opened 2 years ago
  3

• Is there an option to specify the size of eccDNA to detect

  #8 opened 3 years ago
  1

• interpret output files

  #7 opened 3 years ago
  2

• Missing output files

  #6 opened 3 years ago
  8

• Lots of reads skipped due to overflow?

  #5 opened 3 years ago
  0

• Must run ecc_finder under the installation directory?

  #4 opened 3 years ago
  2

• It need to much memory either RAM and ROM?

  #3 opened 3 years ago
  2

• Regarding the problems when running the map-sr

  #2 opened 3 years ago
  2

• output interpretaion

  #1 opened 3 years ago
  8