nkinsky

3d_print_designs

analysis-tools

Code for reading data saved by the Open Ephys GUI

buzcode

Code for internal lab sharing - polishing has started but is by no means complete

CellExplorer

CellExplorer is a graphical user interface (GUI) and standardized pipeline for exploring and characterizing single cells acquired with extracellular electrodes

CNMF_E

Constrained Nonnegative Matrix Factorization for microEndoscopic data

DeepLabCut

Official implementation of DeepLabCut: Markerless pose estimation of user-defined features with deep learning for all animals

DeepSqueak

DeepSqueak: A Deep Learning Based System for Quantification of Ultrasonic Vocalizations

Eraser

Consolidation Blocking + Miniscoping Code

FearReinstatement

ImageCamp

In vivo GCamp behavioral and data processing functions/scripts in MATLAB

nkinsky/Eraser

Consolidation Blocking + Miniscoping Code

nkinsky/ImageCamp

In vivo GCamp behavioral and data processing functions/scripts in MATLAB

nkinsky/3d_print_designs

nkinsky/analysis-tools

Code for reading data saved by the Open Ephys GUI

nkinsky/buzcode

Code for internal lab sharing - polishing has started but is by no means complete

nkinsky/CellExplorer

CellExplorer is a graphical user interface (GUI) and standardized pipeline for exploring and characterizing single cells acquired with extracellular electrodes

nkinsky/CNMF_E

Constrained Nonnegative Matrix Factorization for microEndoscopic data

nkinsky/DeepLabCut

Official implementation of DeepLabCut: Markerless pose estimation of user-defined features with deep learning for all animals

nkinsky/DeepSqueak

DeepSqueak: A Deep Learning Based System for Quantification of Ultrasonic Vocalizations

nkinsky/FearReinstatement

nkinsky/GPSfun

My attempt to have fun with GPX data.

nkinsky/gpxpy

gpx-py is a python GPX parser. GPX (GPS eXchange Format) is an XML based file format for GPS tracks.

nkinsky/ImageAlt

Scripts for analyzing endoscope data, focusing on spatial alternation sessions.

nkinsky/ImageTreadmill

Imaging experiments using treadmill running

nkinsky/minian

miniscope analysis pipeline with interactive visualizations

nkinsky/Miniscope-DAQ-QT-Software

Software for streaming and controlling neural and behavioral data from freely behaving animals

nkinsky/NeuroPy

nkinsky/npy-matlab

Experimental code to read/write NumPy .NPY files in MATLAB

nkinsky/Opto

uLED Opto project code

nkinsky/osc1lite

optical stimulation controller - lite edition (12 channels w/ COTS DACs)

nkinsky/Place-stimulation

Code to provide place specific optogenetic stimulation on the linear track

nkinsky/planets

nkinsky/pomidaq

Portable Miniscope Data Acquisition

nkinsky/scopix

Eichenbaumers working on the Schniterscope project in matlab

nkinsky/sleep_loss_hippocampal_replay

NK fork of sd_paper repository

nkinsky/spyking-circus

Fast and scalable spike sorting in python

nkinsky/test

test depository

nkinsky/TraceFC

Trace Conditioning Imaging + Ephys related code