nleroy917
Building deep learning models for single-cell data.
Databio, University of VirginiaCharlottesville, VA
Pinned Repositories
geniml
Genomic interval machine learning
gtars
Performance-critical tools to manipulate, analyze, and process genomic interval data. Primarily focused on building tools for geniml - our genomic machine learning python package.
heartbreakers
This will scan your Tinder matches for a "Spotify Anthem" and add it to a unique playlist on your Spotify profile titled "heartbreakers"
indcovid
On this site, we investigate how people from communities who historically face health disparities are disproportionately affected by the COVID-19 pandemic.
optipyzer
Multi-Species Codon Optimization Engine
spotify-playlist-analyzer
spottydata
Spotify Playlist Analyzer
spottydata-api
Backend and Web API for spottydata.com
textractor
A simple text extractor for various files. Includes core functionality for extracting text from files, a command-line interface, restful API, and python bindings.
pephub
A web API and database for biological sample metadata
nleroy917's Repositories
nleroy917/spottydata
Spotify Playlist Analyzer
nleroy917/optipyzer
Multi-Species Codon Optimization Engine
nleroy917/indcovid
On this site, we investigate how people from communities who historically face health disparities are disproportionately affected by the COVID-19 pandemic.
nleroy917/karencat.com
my cats website
nleroy917/textractor
A simple text extractor for various files. Includes core functionality for extracting text from files, a command-line interface, restful API, and python bindings.
nleroy917/eido
Validator for PEP objects
nleroy917/gdrs
Rust implementation of genomic distributions
nleroy917/genome_assembler
Components of a genome assembler
nleroy917/geozero
Zero-Copy reading and writing of geospatial data.
nleroy917/interval_basics
nleroy917/kmer-counting
nleroy917/markmeld
A Python package for melding markdown content and YAML structured data
nleroy917/nleroy917.github.io
My personal site
nleroy917/qdrant_client
Python client for Qdrant vector search engine
nleroy917/scribe
nleroy917/seqcosts
nleroy917/sniffers
A basic file sniffer to detect file changes, written in Rust
nleroy917/genimtools-web
Web interface for genimtools with wasm-targeted rust binidngs
nleroy917/bluebellbakery
Hannah's bakery site
nleroy917/Cellcano
Supervised cell type identification for scATAC-seq data
nleroy917/CS6501-final
nleroy917/dicebed
nleroy917/inkscape-palettes
My custom inkscape color palettes
nleroy917/mteb
MTEB: Massive Text Embedding Benchmark
nleroy917/optipyzer-rs
Rust implementation of my multi-species codon optimization algorithm. This is a work in progress.
nleroy917/pephub
A web API and database for biological sample metadata
nleroy917/rust-bio
This library provides implementations of many algorithms and data structures that are useful for bioinformatics. All provided implementations are rigorously tested via continuous integration.
nleroy917/rust-gc-count
A tool for generating wiggle files of GC from DNA written in Rust.
nleroy917/SnapATAC2
Single-cell epigenomics analysis tools
nleroy917/sqlacodegen
Automatic model code generator for SQLAlchemy