Pinned Repositories
activity-prediction
Using data from devices such as Jawbone Up, Nike FuelBand, and Fitbit to to predict the manner in participants they did the exercise.
aws-mutation-calling
A Large Scale, Cloud Based, Low Cost and Reproducible Mutation Calling Pipeline Using Docker Containers
aws-twitter-crawler
Python client for the Twitter Streaming API that parses tweets and stores them in a MySQL.
bioinformatics-algorithms
Python code covering some of the algorithms underlying the following fundamental topics in bioinformatics.
bwa
Burrow-Wheeler Aligner for pairwise alignment between DNA sequences
cloud-scale-bwamem
content
Official content for Harvard CS109
differential-expression-analysis
RNA-seq differential gene expression analysis workflow, implemented using Nextflow and Docker containers.
distributed-computing
A rigorous study of the core Java programming language followed by an inquiry into Java-based distributed computing.
mle-10
Repository for FourthBrain Machine Learning Engineering.
noelnamai's Repositories
noelnamai/2016-python-gene-expression-workshop
Data and Jupyter notebooks for the workshop "Gene Expression Analysis in Python" (2016)
noelnamai/adam
ADAM is a genomics analysis platform with specialized file formats built using Apache Avro, Apache Spark and Parquet. Apache 2 licensed.
noelnamai/aifh
Artificial Intelligence for Humans
noelnamai/auto-sklearn
noelnamai/ballgown
Bioconductor package "ballgown", devel version. Isoform-level differential expression analysis in R.
noelnamai/bioc2016Addendum
noelnamai/bioc2016singlecell
Bioconductor workshop: Analysis of single-cell RNA-seq data with R and Bioconductor
noelnamai/bioCancer
:cancer: :free: A Shiny App for Interactive Multi-OMICS Cancer Data Visualization and analysis
noelnamai/comp-genomics-class
Code and examples for JHU Computational Genomics class
noelnamai/Complete-Striped-Smith-Waterman-Library
noelnamai/Cortana-Intelligence-Gallery-Content
Tutorials and sample code shown in the Cortana Analytics Gallery (https://gallery.cortanaanalytics.com)
noelnamai/datamicroarray
A collection of small-sample, high-dimensional microarray data sets to assess machine-learning algorithms and models.
noelnamai/Deep-Learning-Papers-Reading-Roadmap
Deep Learning papers reading roadmap for anyone who are eager to learn this amazing tech!
noelnamai/DMTK
Microsoft Distributed Machine Learning Tookit
noelnamai/GEN242
Data Analysis in Genome Biology
noelnamai/genecentricmethylation
Algorithms for finding the most relevant DNA methylation probes from a 450K DNA methylation array based on prediction of binary expression data
noelnamai/glia
a string to graph aligner
noelnamai/hacklab-ml
An introduction to ML for Hacklab at the Harvard Innovation Lab
noelnamai/lmfdb
L-Functions and Modular Forms Database
noelnamai/multidplyr
Partitioned data frames for 'dplyr'
noelnamai/MultiQC
Aggregate results from bioinformatics analyses across many samples into a single report.
noelnamai/neural-network-papers
noelnamai/r_updates
noelnamai/rabix
Reproducible Analyses for Bioinformatics
noelnamai/scipyUS2016_dl-image
Introduction to Deep Learning for Image Recognition - SciPy US 2016
noelnamai/skflow
Simplified interface for TensorFlow (mimicking Scikit Learn)
noelnamai/sparkline
jQuery Sparkline HTML Widget for R
noelnamai/stat-learning
Notes and exercise attempts for "An Introduction to Statistical Learning"
noelnamai/useR-machine-learning-tutorial
useR! 2016 Tutorial: Machine Learning Algorithmic Deep Dive http://user2016.org/tutorials/10.html
noelnamai/workshopBioc2016