nolanjj

Pinned Repositories

16S-rDNA-V3-V4
16S rDNA V3-V4 amplicon sequencing analysis using dada2, phyloseq, LEfSe, picrust2 and other tools. Demo: https://ycl6.github.io/16S-Demo/
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amplicon
Statistics and visualization for amplicon data
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biofx_python
Code for Mastering Python for Bioinformatics (O'Reilly, 2021, ISBN 9781098100889)
Language:Python00
Breast-cancer-risk-prediction
Classification of Breast Cancer diagnosis Using Support Vector Machines
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BS-seq-snakemake
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CODA
This is the method CODA(covariation-induced deviation of activity) introduced in the paper "Accurate inference of the full base-pairing structure of RNA by deep mutational scanning and covariation-induced deviation of activity".
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Command-line-text-processing
:zap: From finding text to search and replace, from sorting to beautifying text and more :art:
Language:Shell00
Coursera-ML-AndrewNg-Notes
吴恩达老师的机器学习课程个人笔记
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data-science-notes
Open-source project hosted at https://makeuseofdata.com to crowdsource a robust collection of notes related to data science (math, visualization, modeling, etc)
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metagenomic_snakemake
Metagenomic Snakemake
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nolanjj's Repositories

nolanjj/metagenomic_snakemake
Metagenomic Snakemake
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nolanjj/amplicon
Statistics and visualization for amplicon data
Language:R0 0 00
nolanjj/biofx_python
Code for Mastering Python for Bioinformatics (O'Reilly, 2021, ISBN 9781098100889)
Language:Python00
nolanjj/BS-seq-snakemake
Language:Python00
nolanjj/Coursera-ML-AndrewNg-Notes
吴恩达老师的机器学习课程个人笔记
Language:HTML00
nolanjj/data-science-notes
Open-source project hosted at https://makeuseofdata.com to crowdsource a robust collection of notes related to data science (math, visualization, modeling, etc)
Language:HTML0 0 00
nolanjj/functional-annotation
Pipeline for functional annotation of genomes by integrating data from RNA-seq, ChIP-seq, DNase-seq, etc.
Language:Python00
nolanjj/lefse
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nolanjj/luotao_RNA-seq
nolanjj/microbiome
microbiome R package
nolanjj/ML_medbioinfo
Machine Learning in Medical Bioinformatics
nolanjj/Modeling-and-Data-Mining-Methods-for-Survival-Data-with-an-Emphasize-on-R-Software-
nolanjj/mp_duty
抓取网络文章到github issues保存
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nolanjj/nolanjj.github.io
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nolanjj/PyTorch_Tutorial
《Pytorch模型训练实用教程》中配套代码
nolanjj/R_for_Data_Science
Materials for teaching R and tidyverse
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nolanjj/REKCARC-TSC-UHT
清华大学计算机系课程攻略 Guidance for courses in Department of Computer Science and Technology, Tsinghua University
nolanjj/RNAseqStat
A Pipeline to Process RNAseq Data
nolanjj/RNAseqStat2
nolanjj/scrna-recom
collected resource for scRNA-seq analysis
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nolanjj/scRNA-seq_notes
A list of scRNA-seq analysis tools
nolanjj/Survival_preScreening
Find the optimal supervised (p-value univariate Cox model) and unsupervised (IQR) thresholds for gene expression pre-filtering in the Cox model with penalization (i.e. ridge, lasso, elastic net, adaptive elastic net, univariate Cox).
nolanjj/TCGAsurvival
Scripts to analyze TCGA data
nolanjj/TidyTuesday
My contributions to the #TidyTuesday challenge, a weekly data visualization challenge. All plots are 💯 created in R with ggplot2.
nolanjj/tmpfile
tmp file
nolanjj/tutorial_DESeq2_contrasts
nolanjj/UCSCXenaShiny
📊 An R package for interactively exploring UCSC Xena https://xenabrowser.net/datapages/
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nolanjj/WGCNAShinyFun
R package for my WGCNAshinyApp
nolanjj/Workshop
课题组每周研讨会
nolanjj/zju-icicles
浙江大学课程攻略共享计划
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