nonemotionkiller999

nonemotionkiller999's Stars

• BioinfoMachineLearning/DeepRefine

  A geometric deep learning method for refining and assessing protein complex structures.

  Language:Python153

• Peldom/papers_for_protein_design_using_DL

  List of papers about Proteins Design using Deep Learning

  1.4k171

• vlad-danaila/deep_hiv_ab_pred

  Language:Jupyter Notebook1

• algorithmzuo/algorithm-journey

  左程云的算法和数据结构通关课

  Language:Java1.3k378

• felixsihombing/ABlooper

  Retrain ABlooper on IMGT numbering scheme

  2

• rs239/ablm

  Protein language model customized for antibodies

  Language:Jupyter Notebook618

• dohlee/antiberty-pytorch

  An unofficial re-implementation of AntiBERTy, an antibody-specific protein language model, in PyTorch.

  Language:Jupyter Notebook225

• Bin-Huang/chatbox

  User-friendly Desktop Client App for AI Models/LLMs (GPT, Claude, Gemini, Ollama...)

  Language:TypeScript21.1k2.1k

• RosettaCommons/FvHallucinator

  Language:Python255

• THUNLP-MT/dyMEAN

  This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"

  Language:Python928

• kakaobrain/solvent

  Language:Python689

• mit-ll/AlphaSeq_Antibody_Dataset

  Dataset with quantitative binding scores of scFv-format antibodies against SARS-CoV-2 target peptide

  202

• haddocking/HADDOCK-antibody-antigen

  Material to run the HADDOCK antibody-antigen modelling protocol

  Language:Python199

• ivandon15/Apptest_DeepAb

  APPTEST paper data preprocessing

  Language:Jupyter Notebook1

• dohlee/deepab-pytorch

  An unofficial re-implementation of DeepAb, an interpretable deep learning model for antibody structure prediction.

  Language:Python2

• jianlin-cheng/InterpretContactMap

  Deep learning methods for interpreting protein contact maps

  Language:Python31

• CoderLeixiaoshuai/java-eight-part

  『Java八股文』Java面试套路，Java进阶学习，打破内卷拿大厂Offer，升职加薪！

  Language:Java5.8k988

• jeffreyruffolo/AntiBERTy

  Antibody-specific masked language model

  Language:Python3113

• hpcaitech/FastFold

  Optimizing AlphaFold Training and Inference on GPU Clusters

  Language:Python56286

• HeliXonProtein/OmegaFold

  OmegaFold Release Code

  Language:Python54776

• BioinfoMachineLearning/ATOMRefine

  3D equivariant graph transformer for all-atom refinement of protein tertiary structures

  Language:Python255

• uw-ipd/RoseTTAFold2

  Language:Python16538

• zenodo/zenodo

  Research. Shared.

  Language:Python912243

• RosettaCommons/DeepAb

  Deep learning models and structure realization scripts for the DeepAb antibody structure prediction method.

  Language:Python14227

• Graylab/deepH3-distances-orientations

  Language:Python349