Pinned Repositories
Benchmarking-integration-of-differential-expression
best-of-ml-python
🏆 A ranked list of awesome machine learning Python libraries. Updated weekly.
BiMiR
BiMiR is a bicluster database that provides the condition-specific microRNA target predictions.
CellEnrich
Pathway Enrichment Analysis and Visualization for Single-cell Data
cfiles
A ncurses file manager written in C with vim like keybindings
foreSC
single-cell project
gsasnp2
GSA-SNP2 is successor of GSA-SNP (Nam et al. 2010, NAR web server issue). GSA-SNP2 accepts human GWAS summary data (rs numbers, p-values) or gene-wise p-values (possibly obtained from VEGAS or GATES) and outputs pathway gene sets ‘enriched’ with genes associated with the given phenotype.
Hellinger-distance-between-2-Gaussian-distributions
Estimate the distance between data clusters by Hellinger's difference
noobCoding
scvi-tools
Deep probabilistic analysis of single-cell omics data
noobCoding's Repositories
noobCoding/Benchmarking-integration-of-differential-expression
noobCoding/Hellinger-distance-between-2-Gaussian-distributions
Estimate the distance between data clusters by Hellinger's difference
noobCoding/BiMiR
BiMiR is a bicluster database that provides the condition-specific microRNA target predictions.
noobCoding/CellEnrich
Pathway Enrichment Analysis and Visualization for Single-cell Data
noobCoding/foreSC
single-cell project
noobCoding/gsasnp2
GSA-SNP2 is successor of GSA-SNP (Nam et al. 2010, NAR web server issue). GSA-SNP2 accepts human GWAS summary data (rs numbers, p-values) or gene-wise p-values (possibly obtained from VEGAS or GATES) and outputs pathway gene sets ‘enriched’ with genes associated with the given phenotype.
noobCoding/noobCoding
noobCoding/scvi-tools
Deep probabilistic analysis of single-cell omics data
noobCoding/best-of-ml-python
🏆 A ranked list of awesome machine learning Python libraries. Updated weekly.
noobCoding/cfiles
A ncurses file manager written in C with vim like keybindings
noobCoding/conquer_comparison
Code for evaluation of differential expression methods in single-cell RNA-seq data
noobCoding/ConvNeXt
Code release for ConvNeXt model
noobCoding/desc
Deep Embedding for Single-cell Clustering
noobCoding/distribution-is-all-you-need
The basic distribution probability Tutorial for Deep Learning Researchers
noobCoding/DMMN
Deep Multi-Magnification Network for multi-class tissue segmentation of whole slide images
noobCoding/glmGamPoi
Fit Gamma-Poisson Generalized Linear Models Reliably
noobCoding/gpt-llm-trainer-scgpt
noobCoding/LGTV_WT_Ifnar_10x
Single nuclei RNA seq (10x) of cerebral cortex of LGTV infected C57BL/6 WT and Ifnar-/- mice
noobCoding/llama-from-scratch
Llama from scratch, or How to implement a paper without crying
noobCoding/LTMGSCA
noobCoding/mlops-zoomcamp
Free MLOps course from DataTalks.Club
noobCoding/MuTILs_Panoptic
Amgad M, Salgado R, Cooper LA. A panoptic segmentation approach for tumor-infiltrating lymphocyte assessment: development of the MuTILs model and PanopTILs dataset. medRxiv 2022.01.08.22268814.
noobCoding/noobCoding.github.io
noobCoding/pathology-hooknet
noobCoding/Python
All Algorithms implemented in Python
noobCoding/scGNN
scGNN (single cell graph neural networks) for single cell clustering and imputation using graph neural networks
noobCoding/sciPENN_codes
typical python environment setup