Pinned Repositories
EasyMySQL
A docker container to provide MySQL databases on the fly
Genomics_Deep_Sea_Rhodotorula_mucilaginosa
Genomic resource of Deep-sea Sediment-derived Yeast, Rhodotorula mucilaginosa 50-3¬-19/20B
ICDSB2020
ICDSB2020 - International Conference on Data Science in Biology 2020
International_Webinar_COVID19
International Webinar on COVID-19 pandemic at Institute of Bioinformatics, Bangalore, India
Learn_R_and_Use_R
Learn R and Use R
MARINEFUNGI
mysql
Sous Chefs MySQL Cookbook
mysql-server
MySQL Server, the world's most popular open source database, and MySQL Cluster, a real-time, open source transactional database.
MySQL_Syntax_Examples
readme
novapyth's Repositories
novapyth/MySQL_Syntax_Examples
novapyth/apptainer
Apptainer: Application containers for Linux
novapyth/bamSliceR
Slice and dice controlled-access BAMs for thousands of samples
novapyth/BGC_marine_derived_Aspergillus_ruber
Biosynthetic gene clusters of marine derived Aspergillus ruber
novapyth/biomakefiles
Library makefiles for various bioinformatic tools.
novapyth/cnvkit
Copy number variant detection from targeted DNA sequencing
novapyth/conumee-2
novapyth/CVTree
A whole-genome and alignment-free prokaryotic phylogeny tool
novapyth/data.table
R's data.table package extends data.frame:
novapyth/data_explorations
data explorations - examples by examples
novapyth/ExpansionHunterDenovo
A suite of tools for detecting expansions of short tandem repeats
novapyth/FIREVAT
FInding REliable Variants without ArTifacts
novapyth/funcscan
(Meta-)genome screening for functional and natural product gene sequences
novapyth/Genomic_data_Pseudomonas
Genomic data of Pseudomonas sp. isolated from municipal sewage water
novapyth/grid-engine
An exceptional plugin for grid-based features in the Phaser 3 framework.
novapyth/IlluminaHumanMethylationEPICv2manifest
novapyth/MetaSTAAR
An R package for performing MetaSTAAR procedure in whole-genome sequencing studies
novapyth/minfi
Devel repository for minfi
novapyth/MoCaSeq
Analysis pipelines for cancer genome sequencing in mice.
novapyth/novapyth
Config files for my GitHub profile.
novapyth/PowerToys
Windows system utilities to maximize productivity
novapyth/Py4Bio
Public data for the book Python for Bioinformatics
novapyth/Python-Data-Analysis-Third-Edition
Python Data Analysis, Third Edition, Published by Packt
novapyth/RNA-seq_notes
A continually expanding collection of RNA-seq tools
novapyth/running_process_in_parallel
Running a process in parallel
novapyth/sanbomics_scripts
scripts and notebooks from sanbomics
novapyth/STRling
Detect novel (and reference) STR expansions from short-read data
novapyth/tmap
A very fast visualization library for large, high-dimensional data sets.
novapyth/TrimGalore
A wrapper around Cutadapt and FastQC to consistently apply adapter and quality trimming to FastQ files, with extra functionality for RRBS data
novapyth/TSVview
TSV viewer with some editing and statistics functionality