npechl
Institute of Applied Biosciences, Centre for Research & Technology, HellasThessaloniki, Greece
Pinned Repositories
Contributions
Contribute Packages to Bioconductor
lineagespot
Ιdentify and assign different SARS-CoV-2 lineages based on a single VCF file
acoRn
R package designed for exclusion-based parentage assignment
ampliseq
Amplicon sequencing analysis workflow using DADA2 and QIIME2
babynames
An R package containing US baby names from the SSA
empclima
Microbial co-occurrence network reveals climate and geographic patterns for soil diversity on the planet
InterTADs
Integrating multi-omics data coming from the same physical source (e.g. patient) by taking into account the chromatin configuration of the genome, i.e. the topologically associ-ating domains (TADs)
lineagespot
Ιdentify and assign different SARS-CoV-2 lineages based on a single VCF file
saveImageHigh
Saving an R graph as an image or a pdf with high resolution.
TidyTuesday
A repository containing contributions to the TidyTuesday project
npechl's Repositories
npechl/TidyTuesday
A repository containing contributions to the TidyTuesday project
npechl/InterTADs
Integrating multi-omics data coming from the same physical source (e.g. patient) by taking into account the chromatin configuration of the genome, i.e. the topologically associ-ating domains (TADs)
npechl/empclima
Microbial co-occurrence network reveals climate and geographic patterns for soil diversity on the planet
npechl/lineagespot
Ιdentify and assign different SARS-CoV-2 lineages based on a single VCF file
npechl/metaplantcode_db_curation
npechl/odyssey
Exploring Molecular Biodiversity in Greece: An Interactive R Shiny App Approach
npechl/acoRn
R package designed for exclusion-based parentage assignment
npechl/ampliseq
Amplicon sequencing analysis workflow using DADA2 and QIIME2
npechl/biohackathon-projects-2021
For BioHackathon Europe 2021.
npechl/BrutekForce
npechl/2024-11-ml-biocommons-au
npechl/BrCanAI
npechl/dRd
npechl/Elixir-GR-ML
npechl/empdata
The 150bp sequence-length subset of the EMP (Earth Microbiome Project) dataset
npechl/everse-demo-page
npechl/EVERSE-ResearchSoftware.github.io
EVERSE Webiste
npechl/immunovisual
A collection of charts made with the R programming language, focusing on immunogenetics analyses. Different charts types are being organized into multiple sections, each accompanied by its reproducible code. The gallery spotlights the utilization of prominent R packages such as tidyverse, data.table, and ggplot2.
npechl/inabsensorapp
npechl/metaplantseq
npechl/microgalaxy-survey
npechl/microgalaxy_technical_paper_2024
npechl/npechl.github.io
Personal GitHub page
npechl/offspring
npechl/personalized-fashion
npechl/SnakeCube
Containerized Pipelines
npechl/teiresias2
npechl/tidytuesday-1
Official repo for the #tidytuesday project
npechl/training-material
A collection of Galaxy-related training material
npechl/tripr
T-cell Receptor/Immunoglobulin Profiler {tripr}