npnl/PALS

Issues

• Example data

  #87 opened 2 years ago by HiDinoday
  0

• mask_grabber failed to run

  #85 opened 2 years ago by aiims-himanshu
  0

• gather_csv call after workflow is run

  #67 opened 3 years ago by AlexandreHutton
  0

• graphviz is required but isn't listed in requirements

  #65 opened 3 years ago by AlexandreHutton
  1

• PALS not handling multi-session data correctly

  #68 opened 3 years ago by AlexandreHutton
  0

• gather_csv command line arguments

  #66 opened 3 years ago by AlexandreHutton
  0

• Rerun without overwrite?

  #62 opened 3 years ago by AlexandreHutton
  0

• Add .csv merge after multiproc

  #55 opened 3 years ago by AlexandreHutton
  0

• CorrectedVolume sometimes larger than UncorrectedVolume

  #57 opened 3 years ago by AlexandreHutton
  0

• Sample code

  #49 opened 3 years ago by AlexandreHutton
  0

• Centralize path patterns

  #59 opened 3 years ago by AlexandreHutton
  0

• Add option to supply white matter segmentation

  #56 opened 3 years ago by AlexandreHutton
  0

• Package restructuring

  #48 opened 3 years ago by AlexandreHutton
  0

• Missing setup.py, version

  #44 opened 3 years ago by AlexandreHutton
  0

• Inconsistent use of CamelCase + underscores in config file

  #51 opened 3 years ago by AlexandreHutton
  0

• Singularity image must be built locally

  #46 opened 3 years ago by AlexandreHutton
  0

• Add contributing guide

  #50 opened 3 years ago by AlexandreHutton
  0

• Unit tests

  #47 opened 3 years ago by AlexandreHutton
  0

• Add ANTs module for registration, brain extraction

  #45 opened 3 years ago by AlexandreHutton
  0

• incorporate new images for QC images using nilearn on visualQC module

  #25 opened 3 years ago by lilyrudolphito
  0

• make BIDS compatible

  #24 opened 3 years ago by lilyrudolphito
  1

• use ANTs for brain extraction and registration using a lesion mask

  #22 opened 3 years ago by lilyrudolphito
  0

• convert pals to nipype

  #21 opened 3 years ago by lilyrudolphito
  0

• PALS results empty files

  #38 opened 3 years ago by dubergonzoni
  2

• add in modules for T1 only

  #34 opened 6 years ago by lilyrudolphito
  1

• Add an option to select additional ROIs in ConfigGenerator.

  #36 opened 6 years ago by amitkumarusc
  1

• Make Visual QC as an exclusive operation in ConfigGenerator.

  #37 opened 6 years ago by amitkumarusc
  1

• config generator

  #33 opened 6 years ago by anisha1807
  2

• order of html output files

  #35 opened 6 years ago by anisha1807
  1

• fix lesion correction module bug

  #32 opened 6 years ago by lilyrudolphito
  1

• set up for continuous integration testing

  #23 opened 6 years ago by lilyrudolphito
  0