Pinned Repositories
abifpy
Python module for reading .ab1 trace files
ampify
Ampify is an open and decentralised social platform. See the README for more info and join in!
beginning-python-for-bioinformatics
repository for the code featured in the blog
bio-graphics
Bio::Graphics is a ruby library for visualizing annotations on chromosomes
biopython
mirror of official biopython cvs on github
bioruby
bioruby
dotfiles
.files, including ~/.osx — sensible hacker defaults for OS X
fasta_utilities
A collection of scripts developed to interact with fasta, fastq and sam/bam files.
python_sqlite_wxpython
A short example on how to use wxPython and SQLite to create simple database GUIs in Python
wormmine_testing
Small web app that automatically tests releases
nuin's Repositories
nuin/manning_course
nuin/mosdepth
fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing
nuin/alliancemine
nuin/bioconda-recipes
Conda recipes for the bioconda channel.
nuin/bluegenes
A friendly next-generation interface for Genomic data discovery powered by InterMine
nuin/couchdb-dump
Bash command line scripts to dump &restore a couchdb database
nuin/enrichment
nuin/GenGraph
A repository for the GenGraph toolkit for the creation and manipulation of graph genomes
nuin/IconPark
🍎Transform an SVG icon into multiple themes, and generate React icons，Vue icons，svg icons
nuin/intermine
A powerful open source data warehouse system
nuin/intermine-scripts
All scripts that used to be in the main intermine repository in bio/scripts and intermine/scripts
nuin/interop
C++ Library to parse Illumina InterOp files
nuin/manning_outliers
nuin/metrics_page_2
nuin/metrics_page_example
nuin/mojo
The Mojo Programming Language
nuin/new_pipeline
nuin/popgene.s2js
nuin/python-mastery
Advanced Python Mastery (course by @dabeaz)
nuin/python-nvd3
Python Wrapper for NVD3 - It's time for beautiful charts
nuin/PyVCF
A Variant Call Format reader for Python.
nuin/ROTLA
nuin/rtl8188eus-rpi
A RTL8188EUS driver cross compilation setup for Raspberry Pi
nuin/rustxml
nuin/scdefg
A single page Flask app with a GUI for performing differential expression with scvi-tools. Returns a volcano plot and downloadable tables with DE results.
nuin/Speed-up-your-Python-with-Rust
Speed up your Python with Rust, published by Packt
nuin/sphinx-action-test
Testing repo for my sphinx github action
nuin/wb-search
nuin/wb_file_generator
This file will be mainly used to generate files for populating WormMine
nuin/wormbase_rest
This is an API to the datomic database and provides data to catalyst on a per widget basis as well as information for tools like blast.