nurlicht

3D-Visualization-for-Cell-Biologists

Lecture Materials and many embedded exercises (ImageJ, UCSF Chimera, X3DOM, Three.js)

Algorithms

An-introduction-to-Matlab-for-Life-Scientists

Quick-Start for life scientists willing to use Matlab (for fluorescence microscopy, mass spectrometry, x-ray crystallography, single-particle electron microscopy, kinetics ...).. No background in programming is required.

Apache-Kafka-to-go

Easy to run demos for Apache/Confluent Kafka and tools (ex. efficient search of documentation)

Generative-AI

Frontend client for image generation with OpenAI

Java-Spring-Server

Web server with Java and Spring (AI, Kafka, Security, Database ...)

spring-ai

An Application Framework for AI Engineering

TensorFlow

Interactive data generation and fitting with the AI platform TensorFlow.js

Two-Level-Segmentation

Detection of the full connected shape of bright spots (amid background and dimmer spots)

Volumetric-3D-Stitching

Filling the 3D 'scattering volume' by appropriately-oriented 2D scattering patterns. An analytical model suggests a numerical procedure (using Diffusion Map and the fisrt 9 non-trivial eigenvectors). The Matlab code here 1) synthesizes 2D scattering patterns; 2) Forms the Distance Matrix of mimages; and 3) retrieves the (relative) orientations using the DIstance Matrix.

nurlicht/Volumetric-3D-Stitching

Filling the 3D 'scattering volume' by appropriately-oriented 2D scattering patterns. An analytical model suggests a numerical procedure (using Diffusion Map and the fisrt 9 non-trivial eigenvectors). The Matlab code here 1) synthesizes 2D scattering patterns; 2) Forms the Distance Matrix of mimages; and 3) retrieves the (relative) orientations using the DIstance Matrix.

nurlicht/3D-Visualization-for-Cell-Biologists

Lecture Materials and many embedded exercises (ImageJ, UCSF Chimera, X3DOM, Three.js)

nurlicht/Analytical-3D-Models-Icosahedral-Shells

Model-based few-parameter volumetric 3D reconstruction of virus structures (capsids)

nurlicht/Asymmetric-Mitosis

nurlicht/Generative-AI

Frontend client for image generation with OpenAI

nurlicht/Two-Level-Segmentation

Detection of the full connected shape of bright spots (amid background and dimmer spots)

nurlicht/Algorithms

nurlicht/An-introduction-to-Matlab-for-Life-Scientists

Quick-Start for life scientists willing to use Matlab (for fluorescence microscopy, mass spectrometry, x-ray crystallography, single-particle electron microscopy, kinetics ...).. No background in programming is required.

nurlicht/Apache-Kafka-to-go

Easy to run demos for Apache/Confluent Kafka and tools (ex. efficient search of documentation)

nurlicht/Java-Spring-Server

Web server with Java and Spring (AI, Kafka, Security, Database ...)

nurlicht/spring-ai

An Application Framework for AI Engineering

nurlicht/TensorFlow

Interactive data generation and fitting with the AI platform TensorFlow.js

nurlicht/VTK_PCL_Cpp_3D

Higher-level architectures for using 3D C++ APIs

nurlicht/CellulyzerDemo

Automated tracking and interactive visualization/simulation of select cellular processes

nurlicht/DatabaseViewer

Automated access to MySQL databases with Java.sql and browsing them with Javax.swing

nurlicht/ImageJ-General

nurlicht/ImageJ-GUI

nurlicht/ImageJ-Workflow

Block-Diagram (XML) model of an application-level ImageJ program and an intrinsic visual editor for defining, loading, editing, and running such models

nurlicht/Noise-Robust-Flood-Fill

Masking an image locally, based on mouse-defined 'seed points' and selecting connected areas including the seed points. Two-level thresholding provides noise-robustness.

nurlicht/nurlicht.github.io

nurlicht/oaqjp-final-project-emb-ai

final-project-emb-ai

nurlicht/Object-Detection-with-OpenCV

Interactive and Automated (Classical) Object-Detection with OpenCV

nurlicht/OpenCV

Automated linking of spots in consecutive frames based on their Distance Matrix, plus interactive visualization

nurlicht/Semi-Classical-Light-Propagation