Quantifying agonistic interactions between group-housed animals to derive social hierarchies using computer vision: a case study with commercially group-housed rabbits
Analysis of rabbit videos to automatically infer dominance using group-housed rabbit doe videos recorded by ILVO.
- Action Diagrams: Get segmentation of agonistic moments using optical flow algorithms and plot over time.
- Behaviour Detection: Detection scripts of agonistic behaviors using the tracklet information (more information inside README.md)
- Colab Scripts: Online module tests
- Detectron 2: Get random images for COCO format annotation
- Feeding Series: Analysis of the surrondings of the feeding stations over time
- HPC Analysis: Scripts that run on high-performance computing facility
- Heat Map Scripts: Temporal space usage detection module
- OOP Development: Object-oriented programming scripts
- Rabbit Over Platform: Detection of rabbit does on the top of the elevated platform
- Second Platform: Detection of rabbit does on the top of the second elevated platform used for treatment enhancement
- Tracking: Tracking rabbit does in the action clips using a custom algorithm based on the detection BBOX and re-identification data