oceanproteinportal/ontology

Issues

• Build data ingestion code from raw files

  #2 opened 4 years ago by ashepherd
  1

• Consider how Profiles Vocabulary can help make OPP explainable to non-experts

  #17 opened 4 years ago by ashepherd
  0

• Work out how best to use FileType from DataResource & DataResourceType

  #16 opened 4 years ago by ashepherd
  0

• Add descriptions and example values to each DataResourceParameter

  #15 opened 4 years ago by ashepherd
  0

• Develop Competency Questions

  #14 opened 4 years ago by ashepherd
  0

• Add start/stop indexes to the PeptideIdentification

  #10 opened 4 years ago by ashepherd
  0

• Refactor the selected ProteinIdentification to use OWL restrictions on the BestProteinIdentification class

  #11 opened 4 years ago by ashepherd
  0

• change` identificationBasedOnScore` to a sub-property of new property`identificationScore`

  #12 opened 4 years ago by ashepherd
  0

• Improve our Kegg Orthology mappings

  #13 opened 4 years ago by ashepherd
  0

• Create NamedIndividuals for the Roles

  #8 opened 4 years ago by ashepherd
  0

• Make all the external protein ID services a NamedIndividual of ProteinIdentifierScheme

  #4 opened 4 years ago by ashepherd
  0

• Link identifiers.org to the NamedIndividuals of the ProteinIdentifierScheme

  #5 opened 4 years ago by ashepherd
  1

• Add PFamsDescription as subclass to IdentifierMetadata

  #6 opened 4 years ago by ashepherd
  0

• Add subclasses to SampleIdentifier - OPPGeneratedSampleIdentifier & UserDefinedSampleIdentifier

  #9 opened 4 years ago by ashepherd
  0

• Do we need to add `keggPathwayIndex` to the ontology?

  #7 opened 4 years ago by ashepherd
  3

• Ontology completed

  #3 opened 4 years ago by ashepherd
  3

• Create a mechanism for "Annotations" to a dataset.

  #1 opened 4 years ago by ashepherd
  0