octopode

Comparative biochemist interested in foreign and "extreme" environments like the deep sea. Sometimes I write code to run instruments or analyze data.

@nasaastrobio, @harvard, @mbari-orgCambridge, MA

Pinned Repositories

bathtime
Python interfaces for the humble laboratory waterbath (or thermostatted circulator). Four models and counting!
00
c0operate
Quick scripts for estimating mean intrinsic curvature (bar-c0) from lipidomic data
00
continuous-converge
scripts for detecting convergent adaptation of continuous traits
Language:Python01
cteno-lipids-2021
data repo for ctenophore lipids
Language:R00
homeocurvature-2024
Data, scripts, and figures for "Homeocurvature adaptation of phospholipids to pressure in deep-sea invertebrates"
Language:R1 1 00
humblebragg
lipid SAXS odds and ends
Language:Python00
pyuga
Python client for SRS RGA with added UGA functionality
Language:Python00
pyvectron
Serial data acquisition driver for the Granville-Phillips Convectron 375 vacuum gauge controller
Language:Python00
spectackler
Drivers and software for making spectrophotometric measurements under pressure
Language:Python1 2 00
tidychrom
A dead simple R toolkit for quantitative chromatography
Language:R50

octopode/tidychrom
A dead simple R toolkit for quantitative chromatography
Language:R50
octopode/homeocurvature-2024
Data, scripts, and figures for "Homeocurvature adaptation of phospholipids to pressure in deep-sea invertebrates"
Language:R1 1 00
octopode/spectackler
Drivers and software for making spectrophotometric measurements under pressure
Language:Python1 2 00
octopode/bathtime
Python interfaces for the humble laboratory waterbath (or thermostatted circulator). Four models and counting!
00
octopode/c0operate
Quick scripts for estimating mean intrinsic curvature (bar-c0) from lipidomic data
00
octopode/continuous-converge
scripts for detecting convergent adaptation of continuous traits
Language:Python01
octopode/cteno-lipids-2021
data repo for ctenophore lipids
Language:R00
octopode/humblebragg
lipid SAXS odds and ends
Language:Python00
octopode/pyuga
Python client for SRS RGA with added UGA functionality
Language:Python00
octopode/pyvectron
Serial data acquisition driver for the Granville-Phillips Convectron 375 vacuum gauge controller
Language:Python00
octopode/seelipids
Making patterns visible in complex lipidomic data
Language:R1 0