ojziff

ALS_astrocyte_intron_retention

Scripts for the ALS astrocyte intron retention project

als_genome_instability

Meta-analysis of ipsc-derived motor neurons in ALS

als_mrna_rbp_localisation

Code to reproduce analyses and figures from the manuscript of mRNA and protein mislocalisation in ALS

ALS_reactive_astrocytes_meta

This repository contains scripts to analyse the data and reproduce the figures from the ALS astrocyte meta-analysis A1 paper

ALS_SpinalCord_QTLs

Data Portal for NYGC ALS Spinal Cord

fetchngs

Pipeline to fetch metadata and raw FastQ files from public databases

hpc-notes

Notes on using Crick HPC

ojziff.github.io

pins

Pin, Discover and Share Resources

rnafusion

RNA-seq analysis pipeline for detection gene-fusions

ojziff/als_genome_instability

Meta-analysis of ipsc-derived motor neurons in ALS

ojziff/ALS_astrocyte_intron_retention

Scripts for the ALS astrocyte intron retention project

ojziff/als_mrna_rbp_localisation

Code to reproduce analyses and figures from the manuscript of mRNA and protein mislocalisation in ALS

ojziff/ALS_reactive_astrocytes_meta

This repository contains scripts to analyse the data and reproduce the figures from the ALS astrocyte meta-analysis A1 paper

ojziff/ALS_SpinalCord_QTLs

Data Portal for NYGC ALS Spinal Cord

ojziff/fetchngs

Pipeline to fetch metadata and raw FastQ files from public databases

ojziff/hpc-notes

Notes on using Crick HPC

ojziff/ojziff.github.io

ojziff/pins

Pin, Discover and Share Resources

ojziff/rnafusion

RNA-seq analysis pipeline for detection gene-fusions

ojziff/rnaseq

RNA sequencing analysis pipeline using STAR, HISAT2 and Salmon with gene counts and quality control

ojziff/RNAseqCNV

R package for large-scale CNV analysis from RNA-seq